Southeast Alaska v. United States Corps of Engineers , 486 F.3d 638 ( 2007 )


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  •                   FOR PUBLICATION
    UNITED STATES COURT OF APPEALS
    FOR THE NINTH CIRCUIT
    SOUTHEAST ALASKA CONSERVATION           
    COUNCIL; SIERRA CLUB; LYNN
    CANAL CONSERVATION,
    Plaintiffs-Appellants,
    v.
    UNITED STATES ARMY CORPS OF
    ENGINEERS; TIMOTHY J. GALLAGHER,
    Colonel, in his official capacity as
    District Engineer; LARRY L.                   No. 06-35679
    REEDER, in his official capacity as
    Chief of the Regulatory Branch;                D.C. No.
    CV-05-00012-J-JKS
    DOMINIC IZZO, in his official
    capacity as Principal Deputy                    OPINION
    Assistant Secretary of the Army
    (Civil Works); UNITED STATES
    FOREST SERVICE,
    Defendants-Appellees,
    COEUR ALASKA, INC.; GOLDBELT,
    INC.; STATE OF ALASKA,
    Defendants-Intervenors-
    Appellees.
    
    Appeal from the United States District Court
    for the District of Alaska
    James K. Singleton, Senior District Judge, Presiding
    Argued and Submitted
    December 4, 2006—San Francisco, California
    Filed May 22, 2007
    Before: Procter Hug, Jr., A. Wallace Tashima, and
    Susan P. Graber, Circuit Judges.
    5959
    5960   SOUTHEAST ALASKA CONSERVATION v. USACE
    Opinion by Judge Hug
    5962     SOUTHEAST ALASKA CONSERVATION v. USACE
    COUNSEL
    Thomas S. Waldo and Demian A. Schane, Earthjustice,
    Juneau, Alaska, for plaintiffs-appellants.
    John T. Stahr and Mark A. Nitczynski, U.S. Department of
    Justice, Environment & Natural Resources Division, Wash-
    ington, D.C., for defendants-appellees.
    David J. Burman and Robert A. Maynard, Perkins Coie LLP,
    Boise, Idaho; John C. Berghoff, Jr., and Michael P. Rissman,
    Mayer Brown Rowe & Maw LLP, Chicago, Illinois; Cameron
    M. Leonard, State of Alaska, Department of Law, Fairbanks,
    SOUTHEAST ALASKA CONSERVATION v. USACE          5963
    Alaska; and David C. Crosby, David C. Crosby PC, Juneau,
    Alaska, for defendants-intervenors-appellees.
    Melissa Powers and Allison LaPlante, Pacific Environmental
    Advocacy Center, Portland, Oregon; Joseph M. Lovett, Appa-
    lachian Center for the Economy & the Environment, Lewis-
    burg, West Virginia; and Peter Van Tuyan, Bessenyey & Van
    Tuyn, Anchorage, Alaska, for amici curiae in support of
    plaintiffs-appellants.
    John W. Hartle, City and Borough of Juneau, Juneau, Alaska;
    Amy Gurton Mead, Robertson, Monagle & Eastaugh, Juneau,
    Alaska; Steven J. Lechner, Mountain States Legal Founda-
    tion, Lakewood, Colorado; Michael R. Shebelskie, Hunton &
    Williams LLP, Richmond, Virginia; Harold P. Quinn, Jr.,
    National Mining Association, Washington, D.C.; and Stephen
    F. Sorensen, Simpson, Tillinghast & Sorensen PC, Juneau,
    Alaska, for amici curiae in support of defendants-appellees.
    OPINION
    HUG, Circuit Judge:
    This case presents the question of whether the issuance of
    a permit by the U.S. Army Corps of Engineers violates the
    Clean Water Act.1 The permit issued in this case authorizes
    Coeur Alaska, Inc., to discharge process wastewater contain-
    ing tailings from its gold mine into a lake that is a navigable
    water of the United States. Coeur Alaska proposes to dis-
    charge daily 210,000 gallons of process wastewater contain-
    ing 1,440 tons of tailings from its mine into Lower Slate
    Lake. The tailings in the discharge will raise the bottom ele-
    vation of the lake by 50 feet. A 90-foot high, 500-foot long
    dam will be built to contain the discharge and the area of the
    1
    
    33 U.S.C. §§ 1251-1387
    .
    5964       SOUTHEAST ALASKA CONSERVATION v. USACE
    lake will be increased about three-fold. The U.S. Army Corps
    of Engineers contends that the permit was properly granted
    under § 404 of the Clean Water Act, which relates to the dis-
    posal of “fill material,” and that it is not subject to the effluent
    restrictions of § 301 or § 306 of the Clean Water Act. The
    plaintiffs contend that this mine disposal discharge must com-
    ply with the effluent restrictions of § 301 and § 306, and that
    any permit allowing discharge must be issued by the Environ-
    mental Protection Agency. The district court held that the
    issuance of the permit was proper. We reverse and remand
    with instructions to vacate the permit.2
    I.
    Coeur Alaska intends to open the Kensington Gold Mine
    on the site of a prior mine in southeast Alaska that operated
    from 1897 to 1928. Although the mining operation will
    include several above-ground facilities, the mine itself will be
    entirely subterranean.
    To process the gold ore retrieved from the mine, Coeur
    Alaska will construct a froth-flotation mill facility. In the
    froth-flotation process, ore-bearing rock from the mine will be
    transported to a mill and moved through a series of mechani-
    cal crushing and grinding procedures. After the rock is finely
    ground, it will be fed into a tank where water and chemicals
    referred to as conditioners, frothers, surfactants, and scale
    inhibitors will be added. Air is then pumped into the tank,
    producing bubbles that attach to the gold deposits. The bub-
    bles rise, bringing the gold with them and forming a froth that
    is skimmed off the top.
    2
    We also vacate the permit granted to Goldbelt, Inc., to construct the
    Cascade Point Marine Facility in Berners Bay and the U.S. Forest Ser-
    vice’s Record of Decision approving the general plan because they are
    dependent on the validity of the permit issued by the U.S. Army Corps of
    Engineers to Coeur Alaska.
    SOUTHEAST ALASKA CONSERVATION v. USACE                  5965
    After the gold has bubbled up to the surface and the froth
    is removed, the tailings — residual ground rock — remain as
    a waste product. Of the 2,000 tons of ore that the Kensington
    mine will process each day, only about 100 tons (5 percent)
    contain economically viable gold minerals. About 40 percent
    of the tailings will be used as backfill in the mine. The
    remaining volume is, according to Coeur Alaska, too large to
    transport off site and presents a waste disposal problem. This
    dispute arises from Coeur Alaska’s current plan for address-
    ing that disposal problem.
    Coeur Alaska’s earlier plan of operations for the Kensing-
    ton Gold Mine called for the construction of a “dry tailings
    facility,” in which the mine would dispose of waste from its
    froth-flotation mill on dry “uplands.” This disposal process
    involved the construction of berm and drainage structures
    around the designated disposal area, dewatering the process
    wastewater, and placement of the tailings within an enclosure.
    After the closure of the mine in about 10 to 15 years, Coeur
    Alaska would have been required to cover the disposal area
    with native material to support revegetation. The U.S. Forest
    Service (“Forest Service”) approved the plan of operations for
    the dry tailings facility, and the U.S. Army Corps of Engi-
    neers (“Corps”) and the Environmental Protection Agency
    (“EPA”) issued permits to the company authorizing the con-
    struction of this facility in 1997. The price of gold subse-
    quently dropped to $400 an ounce, however, prompting Coeur
    Alaska to investigate less expensive ways to develop the mine
    project.3 In 2004, Coeur Alaska proposed a new plan of opera-
    tions with significant amendments. The most important
    change for our purposes was that, instead of the dry tailings
    facility, Coeur Alaska proposed to discharge its process
    wastewater containing the tailings directly into nearby Lower
    Slate Lake.
    3
    The price of gold has since been rising steadily and is currently over
    $680 an ounce, thus the original motivation for the change in waste dis-
    posal from the mine no longer exists.
    5966      SOUTHEAST ALASKA CONSERVATION v. USACE
    Lower Slate Lake, a 23-acre subalpine lake in the Tongass
    National Forest, is one of several small lakes in the vicinity
    of the mine. The lake is a fish and wildlife habitat and sup-
    ports about 1,000 Dolly Varden Char (a freshwater fish) and
    other native fish and aquatic life. The lake is also a tributary
    of Slate Creek and drains into Berners Bay.
    Coeur Alaska’s current disposal plan involves piping
    approximately 210,000 gallons of process wastewater, includ-
    ing 1,440 tons of tailings, each day to the bottom of Lower
    Slate Lake in the form of a slurry. This slurry would consist
    of about 45 percent water and 55 percent tailings. A polymer
    and flocculent would be added to the slurry to enhance set-
    tling of the tailings. Over the 10- to 15-year life of the mine,
    approximately 4.5 million tons of tailings would be deposited
    into the lake. The discharge ultimately would raise the bottom
    of the lake 50 feet, to its current high water mark, and nearly
    triple its surface area. Coeur Alaska and the Corps admit that
    the discharge and settling of the tailings into the lake would
    kill all the fish and nearly all the aquatic life. The effluent
    would have a pH factor of over 10, which is considerably
    higher than the lake’s current pH factor, and would contain
    concentrations of several potentially hazardous materials,
    including aluminum, copper, lead, and mercury. The toxicity
    of the discharge may have lasting effects on the lake and may
    negatively affect its ability to sustain aquatic life in the future.
    The Corps intends that aquatic life would be reintroduced into
    the lake, but the extent to which aquatic life could be restored
    eventually is unclear.
    To prepare the lake for use as a wastewater disposal facility
    and the consequent expansion of the lake’s surface, Coeur
    Alaska would construct a 90-foot high, 500-foot long dam at
    the lake’s outfall point. Coeur Alaska’s long-term plan to use
    the lake as a disposal facility also includes the construction of
    a diversion ditch. Constructing the ditch would require cutting
    trees on 7.6 acres of forested land, building a 30-foot wide
    road, excavating and digging a 3,000-foot ditch, and filling in
    SOUTHEAST ALASKA CONSERVATION v. USACE           5967
    4.3 acres of nearby wetlands with 28,800 cubic yards of fill
    material. In addition, during the 10- to 15-year period of the
    lake’s use as a disposal facility, Slate Creek would be diverted
    around the lake through a pipeline.
    The Forest Service approved Coeur Alaska’s current plan
    of operations at the Kensington Gold Mine, including the
    revised disposal plan, in a Record of Decision (“ROD”) on
    December 9, 2004. Because the proposed discharge would
    have the effect of raising the bottom elevation of Lower Slate
    Lake, the Corps reasoned that the permit program under § 404
    of the Clean Water Act, rather than § 402, applies to Coeur
    Alaska’s planned discharges. Accordingly, the Corps issued a
    permit for the discharge into Lower Slate Lake on June 17,
    2005.
    Under the permit, when operations at the mine eventually
    cease, the Corps would require Coeur Alaska to mitigate the
    environmental impacts at the lake by installing a cap of native
    material over the tailings at the bottom of the lake. The Corps
    would also require Coeur Alaska to reintroduce native fish
    species into the lake and monitor the health of the ecosystem.
    II.
    Southeast Alaska Conservation Council, the Sierra Club,
    and Lynn Canal Conservation (collectively “SEACC”) filed
    this lawsuit challenging the Corps’ permit and the Forest Ser-
    vice’s ROD approving the general plan on the grounds that
    they violate § 301(a), § 301(e), and § 306(e) of the Clean
    Water Act. The crux of SEACC’s argument is that the Corps
    violated the Clean Water Act by issuing a permit for the dis-
    charge of process wastewater from a froth-flotation mill into
    a body of water protected by the Clean Water Act.
    After the complaint was filed, the Corps decided to suspend
    the permit and reconsidered its decision to issue the permit.
    For that purpose, the Corps moved for voluntary remand of
    5968      SOUTHEAST ALASKA CONSERVATION v. USACE
    the case before briefing on the merits began, which the district
    court granted on November 14, 2005. The Corps reinstated
    the original permit, without changes, on March 29, 2006. At
    the same time, the Corps issued a revised ROD in which it
    explained its rationale. SEACC then filed an amended com-
    plaint, in which it reiterated its allegations and reasserted its
    causes of action. Coeur Alaska, Goldbelt, Inc., and the State
    of Alaska intervened as defendants. The parties filed cross-
    motions for summary judgment.
    The district court granted summary judgment to the defen-
    dants on August 4, 2006. In its opinion, the district court
    focused on whether the Corps misapplied § 404 of the Clean
    Water Act. The district court noted that SEACC challenged
    the granting of the permit on the grounds that it did not com-
    ply with § 301(e) and § 306(e). It held that if the permit was
    issued under § 404 for the disposal of “fill material,” then
    § 301(e) and § 306(e) were inapplicable.
    SEACC appealed on August 7, 2006, three days after the
    district court’s decision, and this court, on SEACC’s motion,
    granted an injunction pending appeal on August 24, 2006,
    which prohibited Coeur Alaska, the Corps, and the Forest Ser-
    vice from proceeding with further construction activities
    related to preparing the lake for use as a waste disposal site.
    See SEACC v. U.S. Army Corps of Eng’rs, 
    472 F.3d 1097
    ,
    1099 (9th Cir. 2006). Since granting the injunction, we have
    addressed two emergency motions related to stabilizing a tem-
    porary coffer dam that was hastily constructed by Coeur
    Alaska prior to the injunction. Id.; SEACC v. U.S. Army Corps
    of Eng’rs, 
    479 F.3d 1148
    , 1151-52 (9th Cir. 2007).
    III.
    We review the district court’s grant of summary judgment
    de novo and must determine whether the district court cor-
    rectly applied the relevant substantive law. Turtle Island Res-
    toration Network v. Nat’l Marine Fisheries Serv., 340 F.3d
    SOUTHEAST ALASKA CONSERVATION v. USACE            5969
    969, 973 (9th Cir. 2003); United States v. City of Tacoma, 
    332 F.3d 574
    , 578 (9th Cir. 2003). “De novo review of a district
    court judgment concerning a decision of an administrative
    agency means the court views the case from the same position
    as the district court.” Turtle Island, 340 F.3d at 973 (citing
    Nev. Land Action Ass’n v. U.S. Forest Serv., 
    8 F.3d 713
    , 716
    (9th Cir. 1993)). Judicial review of administrative decisions
    under the Clean Water Act is governed by § 706 of the
    Administrative Procedure Act (“APA”). Nat’l Wildlife Fed’n
    v. U.S. Army Corps of Eng’rs, 
    384 F.3d 1163
    , 1170 (9th Cir.
    2004). Under the APA, a court may set aside an agency action
    if the court determines that the action was “arbitrary, capri-
    cious, an abuse of discretion, or otherwise not in accordance
    with law.” 
    5 U.S.C. § 706
    (2)(A); Turtle Island, 340 F.3d at
    973.
    IV.
    Two different regulations contain plain language interpret-
    ing the Clean Water Act that would appear to govern Coeur
    Alaska’s proposed plan of operations at the Kensington Gold
    Mine, but they result in different interpretations of the Act.
    The discharge of wastewater containing tailings from Coeur
    Alaska’s froth-flotation mill operation facially meets the
    Corps’ current regulatory definition of “fill material” because
    it would have the effect of raising the bottom elevation of the
    lake. See 
    33 C.F.R. § 323.2
    (e). Accordingly, under this inter-
    pretation, the discharge would be subject to the permit process
    governed by § 404 of the Clean Water Act. However, EPA
    previously promulgated a performance standard, pursuant to
    § 301 and § 306 of the Clean Water Act, that prohibits dis-
    charges from froth-flotation mills into waters of the United
    States. See 
    40 C.F.R. § 440.104
    (b)(1).
    Both of the regulations appear to apply in this case, yet they
    are at odds. As explained below, the plain language of the
    Clean Water Act resolves this conflict and requires that the
    performance standard controls. The statute is unambiguous on
    5970      SOUTHEAST ALASKA CONSERVATION v. USACE
    this point, and the performance standard applies to discharges
    from the froth-flotation mill at Coeur Alaska’s Kensington
    Gold Mine into Lower Slate Lake. Furthermore, the federal
    agencies’ clear statements at the time they adopted the current
    regulatory definition of the term “fill material” demonstrate
    that they did not intend for waste products subject to effluent
    limitations and performance standards to be regulated as “fill
    material.” For these reasons the Corps should not have issued
    a permit to Coeur Alaska under § 404. The district court’s
    grant of summary judgment in favor of the Corps is reversed,
    and we remand for summary judgment to be entered in favor
    of the plaintiffs with directions to vacate the permit granted
    by the Corps.
    A.
    We begin, as we must, with the text of the Clean Water Act
    itself to determine “whether Congress has directly spoken to
    the precise question at issue. If the intent of Congress is clear,
    that is the end of the matter; for the court, as well as the
    agency, must give effect to the unambiguously expressed
    intent of Congress.” Chevron, U.S.A., Inc. v. Natural Res.
    Def. Council, Inc., 
    467 U.S. 837
    , 842-43 (1984). “If a court,
    employing traditional tools of statutory construction, ascer-
    tains that Congress had an intention on the precise question at
    issue, that intention is the law and must be given effect.” 
    Id.
    at 843 n.9.
    1.
    Congress passed the Clean Water Act in 1972 “to restore
    and maintain the chemical, physical, and biological integrity”
    of the waters of the United States. 
    33 U.S.C. § 1251
    (a). To
    achieve this objective, the Clean Water Act sought to elimi-
    nate completely the discharge of all pollutants into the
    nation’s navigable waters by 1985. 
    33 U.S.C. § 1251
    (a)(1). It
    also sought to make those waters suitable for fish, shellfish,
    wildlife, and recreation. 
    33 U.S.C. § 1251
    (a)(2). One of Con-
    SOUTHEAST ALASKA CONSERVATION v. USACE                      5971
    gress’s principal concerns in passing the Clean Water Act was
    the use of water for waste disposal, which Congress deemed
    “unacceptable.” See S. Rep. No. 92-414, at 7 (1971),
    reprinted in 1971 U.S.C.C.A.N. 3668, 3674 (“The use of any
    river, lake, stream or ocean as a waste treatment system is
    unacceptable.”), quoted in Weyerhauser Co. v. Costle, 
    590 F.2d 1011
    , 1043 (9th Cir. 1978).
    [1] The “cornerstone” and “fundamental premise” of the
    Clean Water Act is § 301, which prohibits all discharges of
    any pollutant except in compliance with specified provisions
    of the statute. Ass’n to Protect Hammersley, Eld, & Totten
    Inlets v. Taylor Res., Inc., 
    299 F.3d 1007
    , 1009 (9th Cir.
    2002); Natural Res. Def. Council, Inc. v. EPA, 
    822 F.2d 104
    ,
    109 (D.C. Cir. 1987). Specifically, § 301(a) provides that “the
    discharge of any pollutant by any person shall be unlawful”
    except when the discharge complies with the requirements of,
    inter alia, § 301, § 306, § 402, and § 404.4 
    33 U.S.C. § 1311
    (a). In furtherance of this mandate, § 301(b) requires
    EPA to adopt increasingly stringent, technology-based efflu-
    ent limitations5 for point sources.6 Once an effluent limitation
    is promulgated, § 301(e) requires that it “shall be applied to
    all point sources of discharge of pollutants in accordance with
    the provisions of” the statute. 
    33 U.S.C. § 1311
    (e) (emphasis
    added).
    4
    The full text of § 301 states: “Except as in compliance with this section
    and sections 1312, 1316, 1317, 1328, 1342, and 1344 of this title, the dis-
    charge of any pollutant by any person shall be unlawful.” 
    33 U.S.C. § 1311
    (a).
    5
    “The term ‘effluent limitation’ means any restriction established by a
    State or the [EPA] on quantities, rates, and concentrations of chemical,
    physical, biological, and other constituents which are discharged from
    point sources into navigable waters, . . . including schedules of compli-
    ance.” 
    33 U.S.C. § 1362
    (11).
    6
    “The term ‘point source’ means any discernible, confined and discrete
    conveyance, including but not limited to any pipe, ditch, channel, tunnel,
    conduit, well, discrete fissure, container, rolling stock, concentrated ani-
    mal feeding operation, or vessel or other floating craft, from which pollu-
    tants are or may be discharged.” 
    33 U.S.C. § 1362
    (14).
    5972        SOUTHEAST ALASKA CONSERVATION v. USACE
    [2] Similarly, § 306 requires EPA to implement even more
    stringent “standards of performance” for new sources such as
    the new Coeur Alaska mine project.7 
    33 U.S.C. §1316
    (b). To
    carry out § 306’s directive, EPA must promulgate a list of cat-
    egories of sources and, for new sources within each category,
    establish a national standard of performance (also referred to
    as a New Source Performance Standard). Id. A standard of
    performance is defined as “a standard for the control of the
    discharge of pollutants which reflects the greatest degree of
    effluent reduction which [EPA] determines to be achievable
    through application of the best available demonstrated control
    technology, processes, operating methods, or other alterna-
    tives, including, where practicable, a standard permitting no
    discharge of pollutants.” 
    33 U.S.C. § 1316
    (a)(1) (emphasis
    added). As with the effluent reductions promulgated under
    § 301,8 § 306 states that, once a standard of performance takes
    effect, “it shall be unlawful for any owner or operator of any
    new source to operate such source in violation of any standard
    of performance applicable to such source.” 
    33 U.S.C. § 1316
    (e). Congress thus “intended these regulations to be
    absolute prohibitions.” E.I. du Pont de Nemours & Co. v.
    Train (“Du Pont”), 
    430 U.S. 112
    , 138 (1977) (citing S. Rep.
    No. 92-414, at 58 (1971)). The legislative history of § 306
    indicates that Congress made a “deliberate choice not to allow
    variances for new sources.” Riverkeeper, Inc. v. EPA, 
    358 F.3d 174
    , 192 (2d Cir. 2004). As such, no exceptions to a
    7
    “The term ‘new source’ means any source, the construction of which
    is commenced after the publication of proposed regulations prescribing a
    standard of performance under this section which will be applicable to
    such source, if such standard is thereafter promulgated in accordance with
    this section.” 
    33 U.S.C. § 1316
    (a)(2).
    “The term ‘source’ means any building, structure, facility, or installa-
    tion from which there is or may be the discharge of pollutants.” 
    33 U.S.C. § 1316
    (a)(3).
    8
    A standard of performance is one type of effluent limitation. See 
    33 U.S.C. § 1362
    (11). Therefore, § 301(e) and § 306(e) have the same practi-
    cal effect in this case.
    SOUTHEAST ALASKA CONSERVATION v. USACE             5973
    standard of performance are allowed. See id.; Du Pont, 
    430 U.S. at 138
    .
    [3] To ensure compliance with effluent limitations and per-
    formance standards established pursuant to § 301 and § 306,
    Congress created the National Pollutant Discharge Elimina-
    tion System (“NPDES”) permit program under § 402 of the
    Act. Through the NPDES program, EPA may permit a dis-
    charge, but only if it complies with § 301 and § 306. Addi-
    tionally, NPDES permits are supposed to limit the release of
    pollutants into waterways as much as possible by imposing
    numerical discharge restrictions. Rybacheck v. EPA, 
    904 F.2d 1276
    , 1283 (9th Cir. 1990). For this reason, the NPDES per-
    mit program is considered “central to the enforcement” of the
    Clean Water Act. Natural Res. Def. Council, Inc. v. Costle,
    
    568 F.2d 1369
    , 1374 (D.C. Cir. 1977).
    [4] In addition to the NPDES permit program, the Clean
    Water Act established a secondary permit program for the dis-
    charge of “dredged or fill material” under § 404. According
    to § 404, the Corps “may issue permits . . . for the discharge
    of dredged or fill material into the navigable waters at speci-
    fied disposal sites.” 
    33 U.S.C. § 1344
    (a). We conclude that
    the permit scheme under § 404 is a limited permit program
    that applies only to dredged or fill material, not to the dis-
    charge of pollutants from industrial or municipal sources.
    2.
    [5] The language of the Clean Water Act is clear on the
    issue at the center of this dispute. First, § 301(a) prohibits any
    discharge that does not comply with several enumerated sec-
    tions, including both § 301 and § 306, as well as § 402 and
    § 404. 
    33 U.S.C. § 1311
    (a). The use of “and” as a connector,
    instead of “or,” indicates that Congress intended for effluent
    limitations and standards of performance to apply to all appli-
    cable discharges, even those that facially qualify for permit-
    ting under § 404. Second, § 301(e) applies effluent limitations
    5974      SOUTHEAST ALASKA CONSERVATION v. USACE
    established by EPA to all discharges. 
    33 U.S.C. § 1311
    (e).
    Third, § 306(e) prohibits any discharge that does not comply
    with performance standards promulgated by EPA. 
    33 U.S.C. § 1316
    (e). In clear and precise terms, § 301 and § 306 require
    that discharges comply with applicable effluent limitations
    and standards of performance. Neither § 301 nor § 306 con-
    tains an exception for discharges that would otherwise qualify
    for regulation under § 404. Rather, § 301 and § 306 are “abso-
    lute prohibitions” with no exceptions. Du Pont, 
    430 U.S. at 138
    .
    [6] Nevertheless, the defendants argue that § 301 and § 306
    do not apply to § 404 permits because § 402 explicitly
    requires compliance with those sections whereas § 404 does
    not. The defendants then reason, by way of negative infer-
    ence, that § 404 contains an implied exception to the require-
    ments of § 301 and § 306 whenever a proposed discharge
    would meet the agencies’ regulatory definition of “fill materi-
    al.” We disagree. Negative inferences and implied exceptions
    are generally disfavored. As the Supreme Court stated in
    United States v. Rutherford, 
    442 U.S. 544
     (1979): “Excep-
    tions to clearly delineated statutes will be implied only where
    essential to prevent ‘absurd results’ or consequences obvi-
    ously at variance with the policy of the enactment as a
    whole.” 
    Id.
     at 552 (citing Helvering v. Hammel, 
    311 U.S. 504
    ,
    510-11 (1941)). That is because courts have “generally pre-
    sumed that Congress acts intentionally and purposely in the
    disparate inclusion or exclusion” of particular language. S.D.
    Warren Co. v. Me. Bd. of Envtl. Prot., 
    126 S. Ct. 1843
    , 1852
    (2006) (quoting Bates v. United States, 
    522 U.S. 23
    , 29-30
    (1997)). The defendants have produced no compelling reason
    to believe that Congress intended an exception within § 404
    that it did not explicitly create. If the defendants’ interpreta-
    tion were correct, Congress would have written § 301 and
    § 306 within § 402, not as separate sections. Moreover, the
    implied exception urged by the defendants, if adopted, would
    turn § 404 into an exception that swallows the rule created by
    § 301, § 306, and § 402 by allowing the Corps to use a nega-
    SOUTHEAST ALASKA CONSERVATION v. USACE                        5975
    tive inference from an exception clause within § 402. Thus,
    § 404’s silence regarding the explicit and detailed require-
    ments in § 301 and § 306 cannot create an exception to those
    sections’ strongly-worded blanket prohibitions.
    The defendants’ interpretation would render § 301(e) and
    § 306(e) effectively meaningless. Courts strive to avoid inter-
    preting a statute “in a manner that renders other provisions of
    the same statute inconsistent, meaningless, or superfluous.”
    Boise Cascade Corp. v. EPA, 
    942 F.2d 1427
    , 1432 (9th Cir.
    1991), quoted in Cuevas-Gaspar v. Gonzales, 
    430 F.3d 1013
    ,
    1024 (9th Cir. 2005); see also Ratzlaf v. United States, 
    510 U.S. 135
    , 140-41 (1994); Watt v. Alaska, 
    451 U.S. 259
    , 267
    (1981) (“We must read the statutes to give effect to each if we
    can do so while preserving their sense and purpose.”). If the
    defendants were correct, the words “all” in § 301(e) and
    “any” in § 306(e)9 would lose their meaning entirely.
    [7] There is a much simpler explanation for the difference
    in language between § 402 and § 404 than the defendants’
    proposed negative inference. If EPA has adopted an effluent
    limitation or performance standard applicable to a relevant
    source of pollution, § 301 and § 306 preclude the use of a
    § 404 permit scheme for that discharge. See 
    67 Fed. Reg. 31,129
    , 31,135 (May 9, 2002); EPA/Corps, Joint Response to
    Comments 12 (May 3, 2002). Accordingly, the NPDES pro-
    gram administered by EPA under § 402 is the only appropri-
    ate permitting mechanism for discharges subject to an effluent
    9
    Section 301(e) provides: “Effluent limitations established pursuant to
    this section or section 1312 of this title shall be applied to all point sources
    of discharge of pollutants in accordance with the provisions of this chap-
    ter.” 
    33 U.S.C. § 1311
    (e) (emphasis added).
    Section 306(e), which applies to new sources like the Coeur Alaska
    mine project, provides: “After the effective date of standards of perfor-
    mance promulgated under this section, it shall be unlawful for any owner
    or operator of any new source to operate such source in violation of any
    standard of performance applicable to such source.” 
    33 U.S.C. § 1316
    (emphasis added).
    5976      SOUTHEAST ALASKA CONSERVATION v. USACE
    limitation under § 301 or a standard of performance under
    § 306. Consequently, there was simply no need for Congress
    to enumerate § 301 or § 306 within § 404 because Congress
    never intended for § 404 to govern discharges subject to efflu-
    ent limitations or performance standards. Rather, when a dis-
    charge is subject to an effluent limitation or performance
    standard, that discharge must comply with the NPDES pro-
    gram as required by § 402. See 67 Fed. Reg. at 31,135; 
    47 Fed. Reg. 54,598
    , 54,606 (Dec. 12, 1982). This construction
    of the statute preserves the full meaning of all of its provi-
    sions without rendering any provision superfluous or resorting
    to negative inferences and implied exceptions.
    Additionally, although § 404 does not contain an explicit
    exception to effluent limitations or standards of performance,
    it does contain exceptions to other provisions of the Clean
    Water Act. Specifically, § 404(f) exempts discharges of
    dredged or fill material from certain activities from regulation
    under § 301(a), § 402, and § 404. 
    33 U.S.C. § 1344
    (f)(1). Dis-
    charges related to agricultural activities and road construction,
    among others, are exempted under § 404(f)(1). Mining is not
    listed as an exempt activity. “Where Congress explicitly enu-
    merates certain exceptions to a general prohibition, additional
    exceptions are not to be implied, in the absence of evidence
    of a contrary legislative intent.” Andrus v. Glover Constr. Co.,
    
    446 U.S. 608
    , 616-17 (1980). The defendants have produced
    no reason to believe that Congress intended additional exemp-
    tions to be created later. Therefore, the lack of any explicit
    exception to § 301 and § 306 within § 404, and the lack of an
    exception for process wastewater from mines, is strong evi-
    dence that Congress did not intend one. Id. Even stronger evi-
    dence is Congress’s insistence in § 404(f) that even the
    discharges from the enumerated activities continue to be sub-
    ject to effluent standards. 
    33 U.S.C. § 1344
    (f).
    [8] Thus, the plain language of the Clean Water Act
    directly resolves the conflict between the regulatory definition
    of “fill material” and EPA’s performance standard for froth-
    SOUTHEAST ALASKA CONSERVATION v. USACE           5977
    flotation mill operations. Pursuant to § 301 and § 306, EPA’s
    performance standard for froth-flotation mills governs this sit-
    uation. The language of § 404 does not lead to a contrary con-
    clusion.
    B.
    Although the plain language of the Clean Water Act
    resolves the apparent regulatory conflict at the heart of this
    case, the regulatory history further demonstrates that neither
    the Corps nor EPA intended for the current regulatory defini-
    tion of “fill material” to replace the performance standard for
    froth-flotation mills. Courts consider contemporaneous expla-
    nations of regulations, such as those published in the Federal
    Register through notice-and-comment rulemaking, in order to
    determine an agency’s intent. See Hillsborough County v.
    Automated Med. Labs., Inc., 
    471 U.S. 707
    , 714-16 (1985);
    Friends of Yosemite Valley v. Norton, 
    348 F.3d 789
    , 797 (9th
    Cir. 2003); League of Wilderness Defenders/Blue Mountains
    Biodiversity Project v. Forsgren, 
    309 F.3d 1181
    , 1189-90 (9th
    Cir. 2002); Kentuckians for the Commonwealth, Inc. v. Riven-
    burgh, 
    317 F.3d 425
    , 446-47 (4th Cir. 2003). And courts will
    not defer to an agency’s interpretation of a regulation that
    contradicts the agency’s intent at the time it promulgated the
    regulation. Gonzales v. Oregon, 
    546 U.S. 243
    , 
    126 S. Ct. 904
    ,
    916 (2006); Thomas Jefferson Univ. v. Shalala, 
    512 U.S. 504
    ,
    512 (1994); Alaska Trojan P’ship v. Gutierrez, 
    425 F.3d 620
    ,
    627-28 (9th Cir. 2005); see also Auer v. Robbins, 
    519 U.S. 452
    , 461 (1997) (an agency’s interpretation of a regulation is
    not entitled to deference where it is “plainly erroneous” or
    “inconsistent with the regulation”) (quoting Bowles v. Semi-
    nole Rock & Sand Co., 
    325 U.S. 410
    , 414 (1945)). When the
    agencies promulgated the current definition in 2002, they
    foresaw and specifically addressed the potential conflict
    between the effects-based definition of “fill material” and per-
    formance standards already in place. To that end, the agencies
    explicitly stated that wastes subject to performance standards
    and effluent limitations would not be considered “fill materi-
    5978      SOUTHEAST ALASKA CONSERVATION v. USACE
    al.” The Corps’ application of the fill rule in this case, there-
    fore, contradicts its interpretation at the time the regulation
    was promulgated.
    1.
    Following its statutory obligation under § 301 and § 306, in
    1982 EPA promulgated effluent limitations and standards of
    performance for sources within the category of ore mining.
    See 
    47 Fed. Reg. 25,682
     (June 14, 1982) (proposed); 
    47 Fed. Reg. 54,598
     (Dec. 3, 1982) (final). Within this category, EPA
    established a subcategory that applied to gold mining. See 
    40 C.F.R. §§ 440.100-440.104
    . For gold mines using the froth-
    flotation mill process, EPA promulgated a zero-discharge
    standard:
    Except as provided in paragraph (b)[2] of this sec-
    tion, there shall be no discharge of process waste-
    water to navigable waters from mills that use the
    froth-flotation process alone, or in conjunction with
    other processes, for the beneficiation of copper, lead,
    zinc, gold, silver, or molybdenum ores or any combi-
    nation of these ores.
    
    40 C.F.R. § 440.104
    (b)(1) (emphasis added); see also 47 Fed.
    Reg. at 25,697 (proposing zero discharge). EPA found that the
    zero-discharge standard was practicable because the majority
    of facilities existing at the time already achieved zero dis-
    charge through recycling and evaporation processes. 47 Fed.
    Reg. at 54,602. EPA promulgated this standard knowing that
    process wastewater discharges from froth-flotation mills con-
    tain a large amount of suspended solids that could otherwise
    qualify for regulation under § 404 pursuant to its effects-
    based definition of “fill material.” See 47 Fed. Reg. at 25,685
    (“Mill process wastewater is characterized by very high sus-
    pended solids levels (often in the percent range rather than
    milligrams per liter) . . . .”). In determining that a strict zero-
    discharge limit was appropriate, EPA determined that the best
    SOUTHEAST ALASKA CONSERVATION v. USACE             5979
    available control technology included the complete recycling
    of process wastewater. See 47 Fed. Reg. at 54,602. Given that
    the regulation facially applies to any discharge from a froth-
    flotation mill, and that it provides some limited exceptions
    that do not include “fill material,” EPA intended for the prohi-
    bition to apply to discharges that would otherwise qualify as
    fill material under § 404. See 67 Fed. Reg. at 31,135. This
    conclusion is also supported by the fact that EPA promulgated
    the regulation notwithstanding its definition of “fill material,”
    which was identical to the definition used by both agencies
    today.
    2.
    [9] The history of the current fill rule also demonstrates that
    both agencies intended for effluent limitations and perfor-
    mance standards to apply even to discharges that facially meet
    the definition of the term “fill material.” The Clean Water Act
    does not define the term “fill material.” Instead, Congress
    implicitly left that term to the Corps and EPA to define. See
    Res. Invs., Inc. v. U.S. Army Corps of Eng’rs, 
    151 F.3d 1162
    ,
    1166 (9th Cir. 1998). As with most regulatory definitions, the
    agencies’ definitions of “fill material” have evolved over
    time. In fact, prior to the current regulatory definition of “fill
    material,” the Corps and EPA defined “fill material” differ-
    ently. The Corps initially used an effects-based test, which
    defined “fill material” as “any pollutant used to create fill in
    the traditional sense of replacing an aquatic area with dry land
    or of changing the bottom elevation of a water body for any
    purpose.” 
    40 Fed. Reg. 31,320
    , 31,325 (July 25, 1975). EPA
    later adopted the identical definition. 
    40 Fed. Reg. 41,292
    ,
    41,298 (Sept. 5, 1975). Two years later, the Corps revised its
    definition and adopted a purpose-based test, which excluded
    from its definition “any pollutant discharged into the water
    primarily to dispose of waste.” 
    42 Fed. Reg. 37,122
    , 37,145
    (July 19, 1977). In adopting its purpose-based definition, the
    Corps explained that there were many waste materials “which
    technically fit within our definition of ‘fill material’ but which
    5980       SOUTHEAST ALASKA CONSERVATION v. USACE
    were intended to be regulated under the NPDES program.” 
    Id. at 37,130
    . EPA, in 1980, chose to keep its effects-based test.
    See 
    45 Fed. Reg. 33,290
    , 33,421 (May 19, 1980).
    The agencies’ differing definitions of “fill material” created
    a potential regulatory overlap. See, e.g., Res. Invs., 
    151 F.3d at 1165-66, 1168-69
     (acknowledging overlap); Kentuckians,
    
    317 F.3d at 432
     (“the Corps acknowledged that the differing
    approaches in defining ‘fill material’ employed by EPA and
    the Corps in their regulations had created some uncertainty
    about their interpretation of the Clean Water Act”). Many
    industrial wastes contain a high proportion of suspended sol-
    ids and, therefore, have the effect of changing the bottom ele-
    vation of a body of water. As such, those wastes could have
    been considered fill material under EPA’s definition. How-
    ever, EPA continued to regulate many of those industrial
    wastes under § 402, and also continued to promulgate new
    effluent limitations and standards of performance for indus-
    trial pollutants with high concentrations of solids, regardless
    of their potential to raise the bottom elevation of a body of
    water. See, e.g., 
    46 Fed. Reg. 8,260
    , 8,292 (Jan. 26, 1981)
    (regulating discharges of suspended solids from log-washing
    processes). Indeed, the new source performance standard for
    froth-flotation mills was adopted in 1982, despite the fact that
    waste from this process would have the effect of raising bot-
    tom elevation and, therefore, could otherwise constitute fill
    material under EPA’s effects-based test. See 47 Fed. Reg. at
    25,685. Thus, notwithstanding the potential regulatory over-
    lap created by the agencies’ differing definitions, EPA regu-
    lated many industrial pollutants under § 402. The agencies
    formally adopted this practice in a Memorandum of Agree-
    ment on Solid Waste (“MOA”) in 1986. 
    51 Fed. Reg. 8,871
    (Mar. 14, 1986). After adoption of the MOA in 1986, the
    Corps continually declined to exercise jurisdiction over mine
    tailings.10
    10
    See, e.g., Memorandum from Col. John W. Pierce, U.S. Army Corps
    of Eng’rs, “Agency Jurisdiction over Certain Activities Connected with
    SOUTHEAST ALASKA CONSERVATION v. USACE                       5981
    In 2002, the agencies promulgated their joint regulation
    defining the terms “fill material” and “discharge of fill materi-
    al.” 67 Fed. Reg. at 31,130. The current regulatory definition
    of “fill material” provides:
    (1) Except as specified in paragraph (e)(3) of this
    section, the term “fill material” means material
    placed in waters of the United States where the
    material has the effect of:
    (i) Replacing any portion of a water of the
    United States with dry land; or
    (ii) Changing the bottom elevation of any
    portion of a water of the United States.
    (2) Examples of such fill material include, but are
    not limited to: rock, sand, soil, clay, plastics, con-
    struction debris, wood chips, overburden from min-
    ing[11] or other excavation activities, and materials
    used to create any structure or infrastructure in the
    waters of the United States.
    (3) The term fill material does not include trash or
    garbage.
    
    33 C.F.R. § 323.2
    (e) (Corps’ regulation); 
    40 C.F.R. § 232.2
    Mineral Extraction, Specifically Gold Mining, in Alaska” 1-2 (Apr. 14,
    1992) (“The tailings behind the dam, however, are a waste product of the
    mining operation and are not under our jurisdiction according to the 1986
    Memorandum of Agreement . . . .”); Letter from Glen E. Justis, U.S. Army
    Corps of Eng’rs 2-3 (June 18, 1991) (“The Corps has neither special
    expertise [n]or jurisdiction by law to evaluate the impacts of the tailings
    discharge. . . . The tailings do not meet the Corps’ definition of fill materi-
    al.”).
    11
    “Overburden” is generally defined as rock or soil cleared away before
    mining. See EPA, Terms of Environment, http://www.epa.gov/
    OCEPAterms/oterms.html (May 14, 2007).
    5982          SOUTHEAST ALASKA CONSERVATION v. USACE
    (EPA’s regulation) (emphasis added). The agencies also
    defined “discharge of fill material” as follows:
    The term “discharge of fill material” means the addi-
    tion of fill material into waters of the United States.
    The term generally includes, without limitation, the
    following activities: . . . placement of overburden,
    slurry, or tailings or similar mining-related materials
    ....
    
    33 C.F.R. § 323.2
    (f); 
    40 C.F.R. § 232.2.12
    At the same time, however, the agencies made clear that
    they did not intend to change their long-standing practice,
    according to which EPA regulates discharges of pollutants for
    which it has established effluent limitations or standards of
    performance under the NPDES program.13
    [W]e emphasize that today’s rule generally is
    12
    The amici brief of 14 members of Congress argues persuasively that
    the adoption of these regulations by the Corps and EPA violates the pur-
    poses and plain language of the Clean Water Act by allowing waste mate-
    rial to be dumped into lakes, rivers, and other waters of the United States.
    SEACC bases its argument on a narrower ground pertaining to this partic-
    ular mine. Thus, we do not reach the issue of the validity of these regula-
    tions.
    13
    In Kentuckians, the Fourth Circuit recognized the Corps’ prior prac-
    tice of not regulating discharges subject to effluent limitations under
    § 404:
    [W]e conclude that the Corps’ interpretation of “fill material” as
    used in § 404 of the Clean Water Act to mean all material that
    displaces water or changes the bottom elevation of a water body
    except for “waste” — meaning garbage, sewage, and effluent that
    could be regulated by ongoing effluent limitations as described in
    § 402 — is a permissible construction of § 404.
    
    317 F.3d at 448
    . The court also explained the Corps’ prior position that
    it was not authorized to regulate discharges subject to effluent limitations.
    
    Id. at 445
    .
    SOUTHEAST ALASKA CONSERVATION v. USACE                  5983
    intended to maintain our existing approach to regu-
    lating pollutants under either section 402 or 404 of
    the CWA. Effluent limitation guidelines and new
    source performance standards (“effluent guidelines”)
    promulgated under section 304[14] and 306 of the
    CWA establish limitations and standards for speci-
    fied wastestreams from industrial categories, and
    those limitations and standards are incorporated into
    permits issued under section 402 of the Act. EPA has
    never sought to regulate fill material under effluent
    guidelines. Rather, effluent guidelines restrict dis-
    charges of pollutants from identified wastestreams
    based upon the pollutant reduction capabilities of
    available treatment technologies. Recognizing that
    some discharges (such as suspended or settleable
    solids) can have the associated effect, over time, of
    raising the bottom elevation of a water due to set-
    tling of waterborne pollutants, we do not consider
    such pollutants to be “fill material,” and nothing in
    today’s rule changes that view. Nor does today’s
    rule change any determination we have made
    regarding discharges that are subject to an effluent
    limitation guideline and standards, which will con-
    tinue to be regulated under section 402 of the CWA.
    Similarly, this rule does not alter the manner in
    which water quality standards currently apply under
    the section 402 or the section 404 programs.
    67 Fed. Reg. at 31,135 (emphasis added). Additionally, in
    their Joint Response to Comments to the proposed rule, the
    agencies restated this position:
    Under today’s rule, we will continue, consistent with
    14
    Sections 304 and 301 are interchangeable in this instance. Section 304
    directs EPA in how to determine the degree of effluent reduction attain-
    able under § 301. Citizens Coal Council v. EPA, 
    447 F.3d 879
    , 883 (6th
    Cir. 2006) (en banc) (citing 
    33 U.S.C. § 1314
    ).
    5984      SOUTHEAST ALASKA CONSERVATION v. USACE
    our long-standing practice, to rely on the existence
    of effluent limitation guidelines or standards or a
    NPDES permit to inform the determination of how
    a particular discharge is regulated under the Act. If
    a specific discharge is regulated under Section 402,
    it would not also be regulated under Section 404, and
    vice versa.
    EPA/Corps, Joint Response to Comments 30. In the same
    document, the agencies clarified that the new rule would not
    expand the jurisdiction of the Corps or permit previously pro-
    hibited discharges: “the suggestion that this rulemaking now
    provides a legal basis for previously illegal activities is not the
    case — no discharges that were previously prohibited are now
    authorized as a result of this rulemaking.” 
    Id.
     Thus, the agen-
    cies clearly intended to exclude discharges subject to effluent
    limitations or performance standards from the new definition
    of “fill material.”
    In fact, when the Corps and EPA first proposed the revised,
    coordinated definition in 2000, they included an explicit
    exemption from the definition of “fill material” for discharges
    subject to effluent limitations or standards of performance.
    See 
    65 Fed. Reg. 21,292
    , 21,299 (Apr. 20, 2000). The stated
    purpose of the exemption was to maintain the agencies’ “cur-
    rent practice,” which was “consistent with paragraph B.5 of
    the 1986 Solid Waste MOA.” 
    Id. at 21,297
    . Although the
    agencies removed the explicit exemption from the final rule,
    they did so only because commenters expressed concern that
    the exception was vague and would create uncertainty regard-
    ing whether the reference to effluent guidelines applied pro-
    spectively or only to those guidelines already in existence at
    the time. See 67 Fed. Reg. at 31,135. As such, the agencies
    still intended to regulate discharges subject to effluent limita-
    tions and standards of performance under § 402.
    The defendants attempt to undermine the clear intent of the
    agencies by focusing on a single sentence of the preamble in
    SOUTHEAST ALASKA CONSERVATION v. USACE                   5985
    which the agencies stated “mining-related material that has
    the effect of fill when discharged will be regulated as ‘fill
    material.’ ” Id. The district court also relied on that one sen-
    tence. However, the defendants and the district court give far
    more weight to that singular statement than it deserves. It is
    difficult to understand why the agencies would painstakingly
    explain in the preamble that the new definition would not
    change their treatment of discharges subject to effluent limita-
    tions and standards of performance, only to completely con-
    tradict themselves two paragraphs later. The agencies
    themselves cleared up any potential confusion in their Joint
    Response to Comments:
    Today’s final rule clarifies that any material that has
    the effect of fill is regulated under section 404 and
    further that the placement of “overburden, slurry, or
    tailings or similar mining-related materials” is con-
    sidered a discharge of fill material. Nevertheless, if
    EPA has previously determined that certain materi-
    als are subject to an [effluent limitation guideline]
    under specific circumstances, then that determina-
    tion remains valid.
    EPA/Corps, Joint Response to Comments 12. Thus, the cur-
    rent fill rule only applies to those tailings and other mining-
    related materials that are not subject to effluent limitations or
    standards of performance.15 The agencies could not have been
    15
    The Fourth Circuit’s holding in Kentuckians is consistent with our
    conclusion. In Kentuckians, the court addressed the issue of whether the
    Corps had authority under § 404 to permit valley fills from mountain-top
    coal mining “when the valley fills serve no purpose other than to dispose
    of excess overburden from the mining activity.” 
    317 F.3d at 439
    . EPA had
    not promulgated a performance standard for mountain-top coal mining, so
    neither § 301 nor § 306 was implicated in that case. Id. at 445. Moreover,
    in that case, the Corps admitted that, under the 2002 definition, “it was
    authorized to regulate discharges of fill, even for waste, unless the fill
    amounted to effluent that could be subjected to effluent limitations.” Id.
    (emphasis added).
    5986      SOUTHEAST ALASKA CONSERVATION v. USACE
    more clear in articulating that this would be their preferred
    approach.
    3.
    [10] In fact, the agencies followed that approach with
    Coeur Alaska for quite some time. The Corps consistently
    informed Coeur Alaska that discharges from its froth-flotation
    mill would not be regulated as fill material under § 404. At
    least, the agencies took that approach up until the time that the
    Corps granted the permit that led to this dispute. Prior to the
    promulgation of the current fill rule in 2002, the Corps relied
    on the 1986 MOA in informing Coeur Alaska that it lacked
    jurisdiction and expertise to permit discharges of tailings from
    the Kensington mine as “fill material.” For example, in a 1998
    ROD, the Corps made clear to Coeur Alaska that it “does not
    regulate the placement of tailings.” U.S. Army Corps of
    Eng’rs, ROD 13 (Jan. 18, 1998). And as late as 2005, EPA
    informed Coeur Alaska that “[b]ecause this project would be
    a new source, the New Source Performance Standards (NSPS)
    for gold mines and mills are applicable to the project.” EPA,
    ROD for § 402 NPDES Permit 3 (June 28, 2005) (citing 
    40 C.F.R. § 440.104
    ). Therefore, in addition to the regulatory
    history, the agencies have an established record of refusing to
    regulate tailings discharged from Coeur Alaska’s planned
    froth-flotation mill at the Kensington mine as fill material
    under § 404.
    C.
    The agencies’ unequivocal statements regarding their intent
    not to override effluent limitations and standards of perfor-
    mance when they promulgated the current fill rule are disposi-
    tive and compel the conclusion that the Corps overstepped its
    authority in issuing a permit to Coeur Alaska under § 404. If
    the agencies actually did intend to repeal or create an excep-
    tion to the performance standard for froth-flotation mills when
    they promulgated the current fill rule, they did not acknowl-
    SOUTHEAST ALASKA CONSERVATION v. USACE            5987
    edge or provide a satisfactory explanation for the change in
    course. When an agency decides to change course by rescind-
    ing or changing a rule, the agency “is obligated to supply a
    reasoned analysis for the change.” Motor Vehicle Mfrs. Ass’n
    of U.S., Inc. v. State Farm Mut. Auto. Ins. Co., 
    463 U.S. 29
    ,
    42 (1983). If an agency fails to comply with that obligation,
    the new rule is “arbitrary, capricious, an abuse of discretion,
    or otherwise not in accordance with law” and is invalid under
    § 706(2)(A) of the APA. Id. at 41 (citing 
    5 U.S.C. § 706
    (2)(A)); see also Bush-Quayle ‘92 Primary Comm., Inc.
    v. Fed. Election Comm’n, 
    104 F.3d 448
    , 453 (D.C. Cir. 1997).
    Not only did the Corps and EPA not acknowledge a change
    in course when they promulgated the fill rule, they actually
    stated the opposite intent. That is, the agencies made clear that
    effluent limitations and standards of performance would con-
    tinue to apply. We could not have interpreted the fill rule as
    creating an exception to the performance standard for froth-
    flotation mills without the agencies complying with the APA
    by explaining their intent in the Federal Register and offering
    an opportunity for notice and comment. See Motor Vehicle
    Mfrs., 
    463 U.S. at 42
    .
    D.
    Finally, the performance standard governs because it is
    more specific. It is a basic principle of regulatory interpreta-
    tion that a regulation dealing with a “narrow, precise, and spe-
    cific subject is not submerged” by a later enacted regulation
    “covering a more generalized spectrum.” Radzanower v.
    Touche Ross & Co., 
    426 U.S. 148
    , 153 (1976), cited in Cal.
    ex rel. Sacramento Metro. Air Quality Mgmt. Dist. v. United
    States, 
    215 F.3d 1005
    , 1013 (9th Cir. 2000). Unlike the fill
    rule, which pertains to fill material generally, the performance
    standard covers froth-flotation mills precisely. See 
    40 C.F.R. § 440.104
    . Consequently, the agencies’ later promulgation of
    the more general fill rule cannot supersede the narrow, pre-
    cise, and specific performance standard for froth-flotation
    mills.
    5988      SOUTHEAST ALASKA CONSERVATION v. USACE
    E.
    The Corps also issued a permit to Goldbelt, Inc., for con-
    struction of a marine terminal facility at Cascade Point and
    issued a ROD approving Goldbelt’s plan of operations. See
    U.S. Army Corps of Eng’rs, Permit to Goldbelt, Inc. (July 15,
    2005); U.S. Army Corps of Eng’rs, Revised ROD 4 (Mar. 29,
    2006). Goldbelt’s permit and ROD are predicated on a mine
    design of which a critical component is Coeur Alaska’s dis-
    charge of process wastewater into Lower Slate Lake. But for
    that mine design, the Cascade Point facility would be unnec-
    essary. In fact, the Corps itself stated that “without Kensing-
    ton mine, the Cascade Point facility would not be constructed
    in the foreseeable future.” U.S. Army Corps of Eng’rs,
    Revised ROD 4. For that reason, the Corps considered the ter-
    minal a “component” of the Kensington project and analyzed
    the terminal proposal in the same Final Supplemental Envi-
    ronmental Impact Statement and Revised ROD as the Ken-
    sington project. 
    Id.
     Indeed, Goldbelt must have had a
    “significantly protectable interest” relating to the subject of
    this case in order to intervene as a defendant, which it chose
    to do. United States v. City of L.A., 
    288 F.3d 391
    , 398 (9th
    Cir. 2002); Fed. R. Civ. P. 24(a)(2). Importantly, in its motion
    to intervene, the company admitted that “Goldbelt’s Cascade
    Point marine terminal is an integral part of the approved Plan
    of Operations, and may be constructed and used solely to ser-
    vice the Kensington Mine as contemplated in that Plan of
    Operations.” Goldbelt further admitted that “[a]ny ruling by
    this Court that delays or disrupts construction of the mine will
    leave Goldbelt with a ‘permitted’ facility that either it cannot
    build or cannot be operated once built because the condition
    precedent of Goldbelt’s permits is construction and operation
    of the Kensington Mine as contemplated in the challenged
    Plan of Operations.” Consequently, Goldbelt’s permit and
    ROD are critically premised on Coeur Alaska’s § 404 permit.
    Because that permit is invalid, the Corps’ permit and ROD for
    the Cascade Point facility should be vacated.
    SOUTHEAST ALASKA CONSERVATION v. USACE           5989
    F.
    [11] Under the APA, the normal remedy for an unlawful
    agency action is to “set aside” the action. 
    5 U.S.C. § 706
    (2).
    In other words, a court should “vacate the agency’s action and
    remand to the agency to act in compliance with its statutory
    obligations.” Defenders of Wildlife v. EPA, 
    420 F.3d 946
    , 978
    (9th Cir. 2005), cert. granted, 
    127 S. Ct. 853
     (2007); see also
    Am. Biosci., Inc. v. Thompson, 
    269 F.3d 1077
    , 1084 (D.C.
    Cir. 2001). For the reasons discussed above, the Corps’ permit
    for the discharge of process wastewater from the froth-
    flotation mill at the Kensington Gold Mine into Lower Slate
    Lake violates § 301 and § 306 of the Clean Water Act. The
    Corps’ permit for construction of a marine terminal at Cas-
    cade Point critically depends on the unlawful permit to Coeur
    Alaska. Consequently, we remand to the district court to
    vacate both permits, as well as the RODs on which they are
    based.
    V.
    In conclusion, we reverse the district court, remand to the
    district court to vacate the permits issued to Coeur Alaska and
    Goldbelt, and vacate the RODs that approved Coeur Alaska’s
    and Goldbelt’s plans of operations. The Corps violated the
    Clean Water Act by issuing a permit to Coeur Alaska for dis-
    charges of slurry from the froth-flotation mill at the Kensing-
    ton Gold Mine. EPA’s performance standard for froth-
    flotation mills, promulgated pursuant to § 301 and § 306 of
    the Clean Water Act, prohibits discharges from such opera-
    tions into the navigable waters of the United States. No
    exceptions are provided by either the regulation or the statute.
    Even though the discharge in this case facially qualifies for
    the permitting scheme under § 404 of the Clean Water Act
    because it will change the bottom elevation of Lower Slate
    Lake, the discharge is nevertheless prohibited by the clearly
    applicable and specific performance standard. The plain lan-
    guage and structure of the Clean Water Act demonstrate that
    5990      SOUTHEAST ALASKA CONSERVATION v. USACE
    EPA’s performance standard governs in this case. Also, the
    agencies’ statements made during promulgation of the regula-
    tion defining “fill material,” as well as their statements made
    to Coeur Alaska during the lengthy permitting process, indi-
    cate that they intended this result. Thus, the district court
    erred in granting summary judgment in favor of the defen-
    dants. The case is remanded to the district court for action
    pursuant to this opinion.
    REVERSED and REMANDED.
    

Document Info

Docket Number: 06-35679

Citation Numbers: 486 F.3d 638

Filed Date: 5/21/2007

Precedential Status: Precedential

Modified Date: 1/12/2023

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