State of Tennessee v. David Johnson ( 2022 )


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  •                                                                                                         04/18/2022
    IN THE COURT OF CRIMINAL APPEALS OF TENNESSEE
    AT JACKSON
    Assigned on Briefs November 10, 2020
    STATE OF TENNESSEE v. DAVID JOHNSON
    Appeal from the Criminal Court for Shelby County
    No. 16-00393       Lee V. Coffee, Judge
    ___________________________________
    No. W2019-01133-CCA-R3-CD
    ___________________________________
    On October 12, 2018, a Shelby County jury convicted the Defendant, David Johnson, of
    aggravated rape committed in February 2000, based on DNA evidence linking him to the
    crime. On appeal, the Defendant asserts that he is entitled to have the conviction
    reversed and dismissed because he was not timely indicted. He also argues that the State
    failed to establish the chain of custody of the DNA evidence. We conclude that the
    Defendant was timely indicted through a “John Doe” indictment and that the trial court
    did not abuse its discretion in finding that the chain of custody was adequately
    established for the DNA evidence. Accordingly, we affirm the trial court’s judgment.
    Tenn. R. App. P. 3 Appeal as of Right; Judgment of the Criminal Court Affirmed
    JOHN EVERETT WILLIAMS, P.J., delivered the opinion of the court, in which NORMA
    MCGEE OGLE and TIMOTHY L. EASTER, JJ., joined.
    Shae Atkinson (at hearing on remand and on appeal),1 Robert Golder (on appeal),
    Claiborne Ferguson (at trial), and Hayden Lawyer (at the motion for a new trial),
    Memphis, Tennessee, for the appellant, David Johnson.
    1
    The trial court initially appointed Mr. Atkinson to represent the Defendant on appeal, but Mr.
    Golder filed a motion for substitution of appellate counsel and filed the Defendant’s appellate brief. The
    Defendant filed various motions seeking to change his representation, and Mr. Golder filed a motion to
    withdraw. This court denied the motions and on November 23, 2021, entered an order declaring that Mr.
    Golder remained counsel of record. On remand, the trial court held a hearing, during which it appointed
    Mr. Atkinson to represent the Defendant after observing that Mr. Golder was working in another county
    as a public defender. This court subsequently appointed Mr. Atkinson to represent the Defendant for the
    remainder of the proceedings on appeal.
    Herbert H. Slatery III, Attorney General and Reporter; Samantha L. Simpson, Assistant
    Attorney General; Amy P. Weirich, District Attorney General; and Cavett Ostner and Dru
    Carpenter, Assistant District Attorneys General, for the appellee, State of Tennessee.
    OPINION
    FACTUAL AND PROCEDURAL HISTORY
    The victim was raped at knifepoint by an intruder in the early morning hours of
    February 14, 2000. Although DNA evidence was collected, the evidence sat in a storage
    facility and was not tested until years after the crime. At trial, the State presented
    evidence that the DNA recovered from the victim was linked to the Defendant, while the
    Defendant argued that the DNA evidence was not reliable.
    In February 2000, the victim and her children shared a ground-floor apartment
    with the victim’s twin sister. The victim’s sister’s bedroom had bars on the window, but
    the victim’s bedroom, where she slept alone, did not. The victim testified that she spent
    the evening of February 13, 2000, with her boyfriend and that she had consensual
    intercourse with him. She returned to the apartment around 1:00 a.m. on February 14,
    2000, took a shower, and went to bed. At around 2:30 or 3:00 a.m., the victim turned
    over and saw a strange man in the window. She turned on the light, and the man told her
    that he had a gun and instructed her to turn the light off. The victim complied, and the
    man came through the window. The man put a butcher knife to the victim’s throat, told
    her to turn onto her stomach, cut her underwear off with the knife, and penetrated her
    vaginally while pressing the knife to her back. He then penetrated her orally. The victim
    testified she could not see his face and could not tell what race the intruder was but that
    he smelled like “a panhandler on the street.” The man fled out the window, and the
    victim reported the rape to her sister, who called the police. The victim’s sister
    confirmed that the victim woke her up, crying and shaking, and reported she had been
    raped.
    The victim was examined at the Memphis Sexual Assault Resource Center
    (“MSARC”), and evidence was collected. Prior to the admission of the DNA evidence,
    the Defendant objected on the basis that the State would not be able to establish the chain
    of custody. The State reviewed its anticipated proof on the issue, and the trial court ruled
    that, “subject to the … State’s … establishing a beginning and the end and no indicia of
    tampering or substitution,” it would allow the evidence to be admitted.
    Ms. Sally DiScenza, an expert in sexual assault examination, testified that she
    collected evidence by swabbing the victim for DNA. She testified she would normally
    -2-
    allow a victim to give a narrative and then specifically ask whether there was also an oral
    or anal assault. She could not state whether she had done so in this case, and the victim’s
    medical records indicated there was no oral assault. Ms. DiScenza sealed the evidence
    she collected from the victim and put it into a locked storage area at the MSARC. At
    trial, she identified the victim’s sexual assault kit, noting that she had signed and sealed
    the kit at the time the evidence was collected.
    Mr. Brian Smith, who was employed at the MSARC in February 2000, testified
    that he transported the evidence to the Memphis Police Department. Mr. Smith had a key
    to the lockbox in the nurse’s station of the MSARC. He identified his signature on the
    evidence collected by Ms. DiScenza and the time and date in 2000 that he transported it.
    He testified that he transferred the evidence to the north precinct of the Memphis Police
    Department on Old Allen Road, where it was placed in a locked, temperature-regulated
    room. He did not know what happened to the evidence after he placed it there.
    Officer Thomas Smith took a statement from the victim at the MSARC, and the
    victim told him that she would not be able to identify her assailant’s face. Officer Smith
    accordingly did not show her a photographic lineup. Officer Smith stated that the victim
    had described the knife as a steak knife. Officer Carl Sanford collected fingerprints from
    the scene and also collected and photographed a pair of women’s underwear found near
    the bed. Officer Smith testified that, while fingerprints were collected from the scene,
    none of the fingerprints were of value. Accordingly, the case was closed as a “dead end.”
    The victim did not hear anything further about the case until Sergeant Israel
    Taylor contacted her in 2014. Sergeant Taylor had been assigned to investigate cases
    with untested sexual assault kits. He acknowledged that he was unable to look at the
    original investigatory file and could only view digital documents related to the case. In
    the victim’s case, a suspect was identified, and Sergeant Taylor met with the victim and
    showed her a photographic lineup which included the Defendant’s photograph. The
    victim reiterated that she had not seen her assailant’s face, and she could not identify any
    of the men in the lineup as the assailant. The victim told Sergeant Taylor that she had
    never had consensual sex with any of the men in the photographic lineup. The victim’s
    sister likewise testified that she had met the victim’s boyfriend from the time of the
    assault and that she did not recognize any of the men in the lineup. Sergeant Taylor
    attempted to locate the victim’s boyfriend from the time of the assault, and although he
    found individuals with the same name in Memphis, he could not locate the correct
    individual. The victim was not able to provide him with enough information to allow
    him to locate her prior boyfriend.
    The victim acknowledged having initially told police, “Because of the smell, I
    thought it could have been a white person, but I’m not sure. It could have been a black
    -3-
    person.” She acknowledged that she had not told police in 2000 about the oral rape and
    explained that she was embarrassed to tell. Sergeant Taylor confirmed that the victim
    was calm but became “uneasy” and “ashamed” when she told him in 2014 about the oral
    rape. The victim did not recall describing the knife as a steak knife rather than a butcher
    knife.
    Special Agent Lawrence James, an expert in forensic biology with the Tennessee
    Bureau of Investigation (“TBI”), performed analysis on the evidence collected from the
    victim. He identified the sexual assault kit through seals, markings, barcodes, his initials,
    and its unique lab number, 123004135. Special Agent James said that the kit first came
    into his laboratory on July 16, 2012. The kit was sealed, and there was no evidence of
    tampering. He testified that if he had seen any evidence of tampering, he would have
    noted it and stopped the analysis. He stated that, with the exception of two pieces of
    orange tape that he had added and marked with his initials to reseal the package, it was in
    the same condition at trial as when he first saw it. Special Agent James’s documentation
    indicated that the package was received on July 16, 2012, from Ms. Amber Garner.
    Special Agent James processed the kit in 2012 and found sperm cells on the
    vaginal swabs collected from the victim. At the time, the TBI required written
    documentation from the district attorney before conducting further analysis.
    Accordingly, his January 8, 2013, report noted, “DNA testing will be performed upon
    request of the District Attorney General and receipt of a proper standard from the
    consensual sex partner.” Special Agent James subsequently received a request for
    testing, and his documentation indicates that the evidence was received again from Ms.
    Garner on July 2, 2013. Special Agent James testified that he reopened the kit prior to
    performing further testing and that all the seals were intact prior to his reopening it. The
    rape kit included a blood standard from the victim, which exhibited some degradation but
    was complete enough to compare to the other evidence. Special Agent James analyzed
    the vaginal swabs collected by Ms. DiScenza and identified a mixture of DNA from at
    least three individuals, and he was able to create a profile for the dominant contributor,
    who was a male. He put the profile into a database, and issued a report on January 13,
    2014, documenting his findings.
    Sergeant Samuel McMinn testified that in 2016, he took a DNA sample from the
    Defendant and submitted the sample for testing to the TBI. Special Agent James
    received the sealed sample on August 26, 2016, and he conducted further analysis. Based
    on his analysis, he concluded that the victim’s DNA was consistent with being a minor
    contributor to the profiles on the vaginal swabs. The Defendant “did match up, or at least
    was consistent, with the major profile from the vaginal swabs.” Special Agent James
    testified that the probability of a randomly selected individual in the African American
    population having the same profile was one in 676.6 quintillion, and the probability was
    -4-
    further reduced in other racial populations. He stated that this probability exceeded the
    world population.
    On cross-examination, he agreed that the instrumentation and chemistry of DNA
    analysis had changed since the time the sample was taken and that DNA analysis was a
    relatively new field. He agreed that DNA would degrade with heat and humidity.
    Special Agent James agreed that it would be important to have a standard from a
    consensual sexual partner to exclude the consensual sexual partner, and he testified he
    never received DNA from the victim’s consensual sexual partner. He agreed that a DNA
    profile from a sample which contained a mixture of different individuals was not
    generated entirely by a machine but that he had to make a determination regarding which
    allele was part of which profile. He also agreed that the alleles identified by the machine
    could be affected by “stutter,” “drop in,” or “drop out.” Special Agent James observed
    some degree of degradation in both the victim’s blood standard and in the vaginal swabs,
    and this degradation might have caused lower level contributors to drop out.
    Nevertheless, he testified that he obtained a “robust profile” from the major contributor
    and that the major contributor was the Defendant.
    The parties entered by stipulation two exhibits for identification. One was a
    supplement by Ms. Garner showing that she retrieved the evidence from “Old Allen
    Station” on July 6, 2012, that she released it to the property and evidence room of the
    Memphis Police Department on July 16, 2012, and that she subsequently transferred it
    from the property and evidence room to the TBI on the same date. She retrieved the
    evidence from the TBI and transferred it to the property and evidence room on January
    31, 2013, and she resubmitted it to the TBI on July 2, 2013, and retrieved it again on
    February 10, 2014. The other report was a “Chain of Custody” report showing the same
    movement of the evidence after it was received by the property and evidence room on
    July 16, 2012.
    The jury found the Defendant guilty of aggravated rape. At the sentencing
    hearing, the Defendant requested but was denied a continuance for the purpose of
    obtaining new counsel, noting in particular that he had never been provided the “John
    Doe” indictment and that the State had not pled facts pertinent to tolling. The parties
    agreed that the Defendant was a Range I offender. The trial court found as enhancement
    that the Defendant had a previous history of criminal behavior in addition to the offenses
    necessary to establish his range. In particular, the Defendant had four prior felonies.
    Two of them took place in Oklahoma and involved the Defendant entering two separate
    women’s dwellings through unlocked windows. In one of the offenses, he assaulted a
    sixteen-year-old girl and beat her nineteen-year-old sister when the sister attempted to
    fend him off. He also had multiple misdemeanor convictions. The trial court sentenced
    him to the maximum of twenty-five years to be served at one hundred percent.
    -5-
    Post-Trial Proceedings
    The Defendant moved for a new trial, asserting various grounds, including that the
    State failed to prove the integrity of the DNA evidence, in particular by not introducing
    evidence regarding the condition of the kit or how the kit was stored and maintained for
    twelve years and by not establishing the identity of the kit. The Defendant’s grounds for
    a new trial also included allegations that the State’s DNA evidence was inaccurate
    according to a defense expert,2 that the State “failed to prove the chain of custody,” that
    the statute of limitations had expired, and that the “John Doe” indictment was not served
    on the Defendant and improperly used DNA coding.
    At the hearing on the motion for a new trial, the Defendant introduced as exhibits
    the laboratory data related to the DNA analysis, noting that his expert relied on the
    materials and that he received them in discovery. Part of the one-hundred-page analysis
    packet was a sheet beginning on “Page 2” which followed what was already the second
    page of Special Agent James’s January 2014 report. The unsigned narrative, which
    appears to have been initialed by Special Agent James, recites that the author became
    aware of an issue in an unrelated case in which evidence was reported as having been
    submitted by the Shelby County District Attorney General’s office on December 13,
    2012, although the evidence was actually in the TBI vault at the time. The author of the
    partial report reviewed other cases in which evidence was purportedly submitted by the
    same investigator on December 13, 2012. Evidence in one unrelated case was actually
    submitted on December 13, 2012. Regarding the case at bar, the report narrative states
    that “123004135 was actually in my possession and being worked on 12/13/12. So the
    evidence transfer in LIMS was clearly erroneous.” The narrative noted that two amended
    reports were issued in the Defendant’s case. The January 13, 2014, report states, “This
    report[] is an amended version of the Serology/DNA report originally issued 12/19/13. It
    has been amended to reflect accurate chain of custody.” The Defendant did not present
    any argument at the hearing on the motion for a new trial related to the “Page 2” partial
    report.
    The trial court ruled that the Defendant was not entitled to relief based on the
    issues raised in the motion for a new trial. In particular, it found that the rape kit was
    sealed and showed no evidence of tampering, that the DNA evidence was described as
    “robust” by the expert, and that the indictment charging the Defendant with aggravated
    rape was a superseding indictment. The trial court stated that no motion was filed to
    2
    At the hearing, the parties mentioned an amended motion filed April 25, 2019, which included
    an affidavit. The amended motion in the record was filed on April 16, 2019, and no affidavit is included
    in the record.
    -6-
    dismiss the indictment based on the statute of limitations, and it reviewed the timeliness
    of the indictment for plain error. 3 It found that the “John Doe” indictment was timely
    filed and that the State did not have to plead any tolling facts with regard to the statute of
    limitations. The court found that a “John Doe” indictment cannot be served and that the
    Defendant was indicted by name pursuant to a superseding indictment after his DNA
    profile was confirmed as a match for the sperm recovered from the victim. At the
    hearing, the Defendant personally addressed the court regarding the indictment, stating
    that he had been trying to obtain a copy for three years, during which time he was
    “constantly bringing it up in your courtroom, Your Honor, that … nobody [will] give me
    a copy of it.” The court denied the motion for a new trial.4
    On appeal, the Defendant filed a brief arguing that the statute of limitations had
    expired because a “John Doe” indictment had never been filed and no tolling facts were
    alleged, and he asserted that the rape kit was not properly authenticated and the chain of
    custody not established. On January 30, 2020, after the Defendant filed his brief, the trial
    prosecutor asked the trial court to supplement the appellate record with the “John Doe”
    indictment, attaching an affidavit which noted that the “John Doe” indictment, number
    15-00747, identified the accused by DNA and was returned on February 12, 2015, and
    that the “John Doe” indictment was superseded by indictment number 16-00393, which
    identified the Defendant by name and was returned on January 21, 2016. On February
    10, 2020, the Assistant Attorney General moved to supplement the record with the “John
    Doe” indictment. This court granted the motion to supplement.
    The Shelby County Clerk subsequently forwarded a certification that the “John
    Doe” indictment, number 15-00747, “has not been received or not to be found.” The
    State moved for an extension of time, noting that it anticipated that the record would be
    supplemented with the “John Doe” indictment. On March 24, 2020, the trial court
    entered a written order to supplement the record, and the clerk subsequently forwarded
    the trial court’s order and the “John Doe” indictment to this court.
    The “John Doe” indictment, number 15-00747, was returned on February 12,
    2015, and it alleged that “John Doe,” TBI case number 1230004135, committed
    aggravated rape of the victim in the case at bar between February 12 and February 15,
    3
    The attorney initially representing the Defendant at trial filed a motion to dismiss the indictment
    based on a due process violation premised on preindictment delay relative to the 2016 superseding
    indictment, but the record does not reflect any resolution of this motion.
    4
    While a written order is not in the appellate record, this court ordered and received a
    supplemental record with the minute entry showing that the motion was denied. See State v. Byington,
    
    284 S.W.3d 220
    , 223 (Tenn. 2009) (holding that when the record contained a transcript of the denial of
    the motion for a new trial but no order, the proper procedure was to order supplementation of the record).
    -7-
    2000. The indictment contained the DNA profile of the perpetrator, identifying the loci
    used and the numerical values associated with the loci. The technical record on appeal
    contains an indictment returned on January 21, 2016, naming the Defendant in the
    aggravated rape of the victim committed on February 12, 2000. Prior to trial, the
    prosecutor asked for an amendment to the 2016 indictment, noting that the 2016
    indictment was a “superseding indictment that lists David Johnson,” that the correct date
    range was between February 12 and February 15, 2000, and that “[t]he John Doe warrant
    that was originally issued had the correct range of dates, February the 12th of 2000,
    through February the 15th of 2000.” Trial counsel informed the court that he did not
    believe there was a good faith basis to object to the amendment, but the Defendant
    addressed the court and objected to the amendment of the superseding indictment, putting
    forth a contention that there was no “John Doe” indictment.
    After the trial court clerk supplemented the record with the “John Doe”
    indictment, the State filed its appellate brief. Subsequently, on May 8, 2020, the
    Defendant moved to strike the supplemental record containing the “John Doe”
    indictment, arguing that the indictment “magically appeared,” under “suspicious
    circumstances” and had been improperly included because it had not been made part of
    the record below or considered by the trial court. The Defendant also argued that the
    indictment was improperly supplemented because the court’s order to supplement the
    record occurred after an improper ex parte meeting with the prosecutor. The State
    responded that appellate counsel had been aware of the motion to supplement for three
    months and had waived any objection. It argued that the record contained numerous
    references to the “John Doe” indictment and that the indictment was therefore properly
    includable. The State’s response included a declaration by the Assistant District Attorney
    General (the “ADA”) that the trial court had granted a January 2020 motion to
    supplement, that the clerk’s office would not supplement without a written order, and that
    he obtained a written order in March 2020. The declaration stated that the ADA
    informed the Defendant’s trial counsel that he was seeking to supplement the record, and
    that trial counsel had no objection. This court ordered and received supplemental
    briefing on the issue surrounding the supplementation of the record.
    In its January 19, 2021, order, this court expressed “deep concern about the
    Defendant’s ‘thinly-veiled’ allegation that the State fraudulently manufactured the ‘John
    Doe’ indictment,” noting that the Defendant based the claim in part on the inaccurate
    assertion that the “John Doe” indictment was never mentioned during trial proceedings.
    However, because the Defendant’s appellate counsel was not given proper notice of the
    hearing in the trial court regarding supplementation, we remanded the case for a hearing
    and for the trial court to make written findings regarding whether the “John Doe”
    indictment in the appellate record accurately reflects what occurred in the trial court.
    -8-
    On November 22, 2021,5 the trial court held a thorough hearing and entered
    detailed findings of fact to facilitate this court’s appellate review. The trial court found
    that the delay in holding a hearing was attributable to the Defendant, whose counsel
    “abandoned him basically,” because the trial court “could not get [counsel] to come to
    court.” The court noted that, after further delay during which the Defendant attempted to
    hire private counsel, the trial court had appointed new counsel for the purpose of holding
    the hearing.
    At the hearing, the ADA who tried the case testified that, after communicating
    with the Assistant Attorney General assigned to the appeal, he asked the trial court to
    supplement the record. The ADA submitted an affidavit with his motion to supplement
    the record, and in the affidavit, he stated that the “John Doe” indictment, which identified
    the Defendant by DNA, was superseded by an indictment naming the Defendant. The
    ADA had contacted trial counsel’s office before addressing the trial court. The ADA
    presented the “John Doe” indictment to the trial court for the purpose of supplementing
    the record. He testified that he retrieved the “John Doe” indictment from the “clerk’s
    jacket,” and he identified the “John Doe” indictment, which was made an exhibit to the
    hearing. The ADA stated that there was never “any question as to the existence of” a
    “John Doe” indictment. He testified that the State’s file number on the “John Doe”
    indictment was AX1896 and that the number on the superseding indictment was
    AX1896A, indicating that it superseded the prior indictment. He agreed that the
    superseding indictment was subsequently amended to reflect the correct dates of the
    offense.
    Ms. Cassaundra Horton, who worked for the criminal court clerk’s office, testified
    that each indictment would come with an indictment number and a number from the
    District Attorney General’s office, and that each case would be assigned a “C” number
    for the Odyssey data system. If an indictment listing a “John Doe” was superseded by an
    indictment with a named individual, the indictments would have different numbers. She
    stated that she searched several times for the “John Doe” indictment, number 15-00747,
    and that every time she entered the indictment number, “it [would] come[] back no match
    found.” She testified that the system would not retrieve any not-in-custody (or “John
    Doe”) cases and that these cases would only be visible if a superseding case was linked to
    them. Typically, a superseding case would not be linked to a “John Doe” indictment, and
    it was not linked in this case. The cases were linked only by the number assigned by the
    District Attorney General’s office. She stated that while the “John Doe” indictment
    would not be accessible on the computer system, that did not mean that the indictment
    did not exist.
    5
    This court filed an order on the day after the hearing, November 23, 2021, noting that no
    supplement had been received and ordering the trial court to update this court on the status of the remand.
    -9-
    In order to clarify the record to facilitate appellate review, the trial court conducted
    a thorough analysis of the issue and made specific findings of fact. Regarding the clerk’s
    initial certification that the “John Doe” indictment had “not been received or [was] not to
    be found,” the trial court found that statute prohibited an indictment returned against a
    person not in custody from being inspected by any person except the judge, clerk of the
    court, and the district attorney general until the defendant had been arrested. See T.C.A.
    §§ 40-13-111, -112; State v. Wood, 
    924 S.W.2d 342
    , 346 (Tenn. 1996) (noting that a
    sealed indictment has the effect of formally charging a defendant but “is not subject to
    inspection by, or disclosure to, the public until the defendant is arrested or makes bail”).
    The court found that in this case, the “John Doe” indictment was never served on the
    Defendant because once his identity was confirmed through DNA analysis, a superseding
    indictment was issued. The Defendant was ultimately arrested and served with the
    superseding warrant. The court found that because the “John Doe” indictment had never
    been served, the clerk’s office could not legally make the document public. The trial
    court concluded that “[t]he indictment has continuously been in the custody of the office
    of the Shelby County Criminal Court Clerk.” (Emphasis in the original.) The court
    found that the indictment should be included in the record and that the supplemental
    record consisting of the “John Doe” indictment accurately reflected what had occurred in
    the trial court.
    ANALYSIS
    I. “John Doe” Indictment
    The Defendant argues that prosecution was not begun within the limitations period
    because there was no “John Doe” indictment. He asserts the trial court erred insofar as it
    denied his claim based on failure to raise the issue prior to trial. He also contends that
    even if the “John Doe” indictment existed, the superseding indictment was invalid for
    failing to plead specific facts as to tolling. The State responds that the Defendant was
    timely indicted through the “John Doe” indictment and through the superseding
    indictment. The State asserts that the “John Doe” indictment was properly included as a
    supplement to the record. We conclude that the “John Doe” indictment is properly before
    this court and that the record reflects that the Defendant was indicted within the statutory
    limitations period.
    A. Supplementation of the Record
    The Defendant moved for this court to strike the supplemental record containing
    the “John Doe” indictment, asserting that it was not properly includable. He cited to the
    Rule regarding hearsay to argue that the indictment was not self-authenticating because
    the circumstances of its preparation indicated a lack of trustworthiness. See Tenn. R.
    - 10 -
    Evid. 803(8) (providing a hearsay exception for public records “[u]nless the source of
    information or the method or circumstances of preparation indicate lack of
    trustworthiness”). The State argued that the indictment, as a certified copy of a public
    record, was self-authenticating and that the trial court had properly ruled on the validity
    of the indictment. See Tenn. R. Evid. 902(4).
    Tennessee Rule of Appellate Procedure 24(e) provides:
    If any matter properly includable is omitted from the record, is improperly
    included, or is misstated therein, the record may be corrected or modified to
    conform to the truth. Any differences regarding whether the record
    accurately discloses what occurred in the trial court shall be submitted to
    and settled by the trial court regardless of whether the record has been
    transmitted to the appellate court. Absent extraordinary circumstances, the
    determination of the trial court is conclusive. If necessary, the appellate or
    trial court may direct that a supplemental record be certified and
    transmitted.
    Tenn. R. App. P. 24(e). However, supplementation should be limited to matters
    necessary to demonstrate what transpired in the trial court:
    Nothing in this rule shall be construed as empowering the parties or any
    court to add to or subtract from the record except insofar as may be
    necessary to convey a fair, accurate and complete account of what
    transpired in the trial court with respect to those issues that are the bases of
    appeal.
    Tenn. R. App. P. 24(g). Supplementation is not limited to matters introduced into
    evidence at trial, but may include other matters considered by the trial court. State v.
    Housler, 
    167 S.W.3d 294
    , 297 (Tenn. 2005) (concluding that a transcript used during trial
    was properly includable although it was never introduced as an exhibit); see State v.
    Smotherman, 
    201 S.W.3d 657
    , 661 (Tenn. 2006) (the record did not show that the search
    warrant and affidavit were entered into evidence, but they were properly included in a
    supplemental record because it appeared that the trial court considered them). Matters
    not considered below are not properly includable. State v. Rogers, 
    188 S.W.3d 593
    , 611
    (Tenn. 2006) (concluding that sealed records which were part of pretrial discovery but
    were never before the trial court were not includable in the appellate record).
    “[A]bsent extraordinary circumstances, an appellate court does not have the
    authority to refuse to consider matters that are determined by the trial court judge to be
    appropriately includable in the record.” Bradshaw v. Daniel, 
    854 S.W.2d 865
    , 869
    - 11 -
    (Tenn. 1993) (concluding that the appellate court erred in refusing to consider the
    transcript of the first trial when the trial court had considered that testimony in denying
    summary judgment). The “dual goals of avoiding technicality and expediting a just
    resolution of the case on its merits …. are achieved by according deference to the trial
    court’s decision as to which matters are properly includable in the record, thereby
    avoiding additional litigation on that subject alone.” Housler, 
    167 S.W.3d at 296
    . As we
    noted in our order remanding the case, the trial court is in the best position to determine
    which matters are “necessary to provide a fair, accurate, and complete account of the
    proceedings upon which the appeal is based.” 
    Id.
    Because the parties agreed that the supplementation took place pursuant to a
    hearing of which the Defendant’s appellate counsel had no notice and during which he
    had no opportunity to be heard, we remanded for the trial court to hold a hearing
    regarding whether the “John Doe” indictment was properly includable in the record. The
    trial court conducted a very thorough hearing and entered detailed findings of fact
    regarding the matter. At the hearing, the prosecutor identified the “John Doe”
    indictment, number 15-00747, and he stated that he had obtained it by retrieving it from
    the “clerk’s jacket.” He noted that the numbers assigned to the “John Doe” indictment
    and the 2016 indictment reflected that the 2016 indictment was a superseding indictment
    of the “John Doe” indictment. Ms. Horton testified that a “John Doe” indictment would
    not be accessible through the computer system used by the clerk’s office unless it was
    specifically linked to a superseding indictment. The trial court found that the “John Doe”
    indictment had “continuously been in the custody of the office of the Shelby County
    Criminal Court Clerk.” It found that the indictment had not been made accessible to the
    Defendant or the public because, pursuant to Tennessee Code Annotated sections 40-13-
    111 and -112, it is a misdemeanor to allow any person other than the judge, the
    prosecutor, and the clerk to inspect an indictment against a person not in custody prior to
    its being served. See T.C.A. §§ 40-13-111 (“When an indictment is found against any
    person not in actual custody or who has not given bail to answer to the indictment, that
    indictment shall not be inspected by any person except the judge and clerk of the court
    and the district attorney general until the defendant has been arrested.”); -112(a); -112(b)
    (making disclosure of the indictment a Class A misdemeanor). The trial court concluded
    that the “John Doe” indictment should be included in the appellate record because it
    accurately reflected what transpired in the trial court with respect to issues raised on
    appeal.
    The Defendant’s supplemental brief challenged the authentication of the “John
    Doe” indictment. Under Tennessee Rule of Evidence 902(4), no extrinsic evidence of
    authenticity is required for:
    - 12 -
    A copy of an official record or report or entry therein, or of a document
    authorized by law to be recorded or filed and actually recorded or filed in a
    public office (including data compilations in any form), certified as correct
    by the custodian or other person authorized to make the certification, by
    certificate complying with paragraph (1), (2), or (3) of this rule or
    complying with any Act of Congress or the Tennessee Legislature or rule
    prescribed by the Tennessee Supreme Court.
    Tenn. R. Evid. 902(4). Here, the indictment was recorded or filed in a public office and
    certified as correct by the custodian of records. Id. The certification bore a seal
    purporting to belong to “a political subdivision, department, office, or agency” of the
    State. See Tenn. R. Evid. 902(1). In any event, the document was authenticated on
    remand by the testimony of the ADA, who identified the “John Doe” indictment as the
    one he retrieved from the “clerk’s jacket.” The Defendant claimed in his brief urging this
    court to strike the document that the circumstances of the preparation of the document
    indicated a lack of trustworthiness under Tennessee Rule of Evidence 803(8) because the
    clerk initially supplemented the record with a certification that the indictment could not
    be located. We note that this Rule pertains to hearsay, but in any event, the trial court
    found that the indictment had been continuously in the clerk’s possession and was simply
    not produced due to the statutory mandates in Tennessee Code Annotated sections 40-13-
    111 and -112.
    The trial court ordered the record to be supplemented with the “John Doe”
    indictment. We conclude that there are no “extraordinary circumstances” which would
    undermine the conclusive nature of the trial court’s determination. See Tenn. R. App. P.
    24(e). Therefore, we will consider the “John Doe” indictment in evaluating the
    Defendant’s claim that the statute of limitations prohibits his prosecution.
    B. Statute of Limitations
    The Defendant asserts that the trial court erred in reviewing the issue regarding the
    statute of limitations for plain error because he was not required to raise the issue prior to
    trial. He also argues that prosecution was barred because it was not begun in the
    statutory limitations period and that even if the “John Doe” indictment was timely
    returned, the superseding indictment failed to plead tolling facts. The State responds that
    the prosecution was properly commenced prior to the expiration of the statute of
    limitations through the filing of the “John Doe” indictment.
    Prosecution of a felony offense is barred unless it is begun within the statutory
    limitations period. T.C.A. § 40-2-101. The limitations period serves to protect against
    delay and the use of stale evidence and serves as an incentive to efficient prosecution.
    - 13 -
    State v. Burdick, 
    395 S.W.3d 120
    , 124 (Tenn. 2012). A statute of limitations is not
    jurisdictional but may be waived so long as the waiver is knowingly and voluntarily
    entered. State v. Pearson, 
    858 S.W.2d 879
    , 887 (Tenn. 1993). Although the right to
    timely prosecution is not a fundamental right, it is nevertheless “substantial.” 
    Id.
     “To
    determine whether a knowing and voluntary waiver of the statute of limitations exists, the
    court utilized ‘the same standard applied in determining whether there has been an
    effective waiver as to fundamental rights.’” State v. Shell, 
    512 S.W.3d 267
    , 274 (Tenn.
    Crim. App. 2016) (quoting Pearson, 
    858 S.W.2d at 887
    ). The relinquishment of the right
    to a timely prosecution may not be presumed from a silent record. Pearson, 
    858 S.W.2d at 887
    . Here, we agree with the Defendant that the record does not indicate that he
    waived his right to indictment within the limitations period.
    The prosecution for a Class A felony offense must be begun within fifteen years.
    T.C.A. § 40-2-101(b)(1) (1998); T.C.A. § 39-13-502(b) (2000) (classifying aggravated
    rape as a Class A felony). “A prosecution is … commenced, within the meaning of this
    chapter, by finding an indictment or presentment or the issuing of a warrant identifying
    the offender by a deoxyribonucleic acid (DNA) profile.” T.C.A. § 40-2-104 (2013); see
    2013 Tennessee Laws Pub. Ch. 205 § 2 (noting that the amendment related to indictment
    by DNA profile “shall apply to the commencement for any offense, regardless of when
    committed” so long as the limitations period has not expired).
    A superseding indictment is one obtained without dismissal of the prior
    indictment, and the prosecution has the broad discretion to seek a superseding indictment
    so long as jeopardy has not attached. State v. Harris, 
    33 S.W.3d 767
    , 771 (Tenn. 2000).
    “Thus, the State may obtain a superseding indictment at any time prior to trial without
    dismissing the pending indictment and may then select the indictment under which to
    proceed at trial.” 
    Id.
    So long as a timely indictment is pending and the charges are neither broadened
    nor substantially amended, the superseding indictment may be filed after the statute of
    limitations has run. State v. Lawson, 
    291 S.W.3d 864
    , 872 (Tenn. 2009). “Further, the
    subsequent indictment need not include ‘commencing facts’ to establish that the
    prosecution was timely and initiated by other of the statutory methods.” 
    Id.
     The
    Defendant’s argument that “the original indictment must be specifically pled as a ‘tolling
    fact’ to justify the issuance of a time-barred indictment” is contrary to law. When an
    indictment has been timely issued, a superseding indictment need not allege facts
    showing that the prosecution was commenced within the limitations period. State v.
    Nielsen, 
    44 S.W.3d 496
    , 499-500 (Tenn. 2001) (distinguishing State v. Comstock, 
    326 S.W.2d 669
     (Tenn. 1959), relied on by the Defendant here, on the basis that the timely
    filed indictment in Comstock had been quashed); State v. Messamore, 
    937 S.W.2d 916
    ,
    919 (Tenn. 1996) (the State was not required to plead tolling facts when prosecution was
    - 14 -
    timely commenced by means other than the indictments, which were returned after the
    limitations period).
    Because “a DNA profile exclusively identifies an accused with nearly irrefutable
    precision,” the inclusion of a DNA profile on a “John Doe” warrant is sufficient to
    identify a defendant with reasonable certainty as required by constitution and statute.
    Burdick, 395 S.W.3d at 128 (citing U.S. Const. amend. IV; Tenn. Const. art. I, § 7;
    T.C.A. § 40-6-208; Tenn. R. Crim. P. 4(c)(1)(B)). Accordingly, “[a] criminal
    prosecution is commenced if, within the statute of limitations for a particular offense, a
    warrant is issued identifying the defendant by gender and his or her unique DNA profile.
    Furthermore, a superseding indictment in the defendant’s proper name provides the
    requisite notice of the charge.” Id. at 130.
    In his motion to strike, the Defendant asserts that he has never been identified as
    the person in the “John Doe” indictment because the jury was not provided the “John
    Doe” indictment and accordingly never made a factual finding that he was the person
    whose DNA was listed in the “John Doe” indictment. He does not, and cannot, cite any
    authority for the proposition that the jury was required to find beyond a reasonable doubt
    that his DNA was listed in the original “John Doe” indictment. The jury found beyond a
    reasonable doubt that the Defendant’s DNA was recovered from the victim’s vaginal
    swabs, and accordingly, his identity was properly established at trial. We note that the
    exhibits contain analysis listing the numerical DNA profile obtained from the sperm in
    the swabs, which matches that listed in the “John Doe” indictment, and that Special
    Agent James testified that the Defendant’s known DNA matched the DNA from the
    swabs. In any event, the Defendant never presented to the trial court his contention that
    the indictment did not name him because his DNA did not match that listed in the “John
    Doe” indictment, and he never challenged the superseding indictment on this ground
    below. Accordingly, the court was not given the opportunity to make any factual
    findings regarding the identity of the DNA listed in the “John Doe” indictment. Insofar
    as this issue is raised, it is waived, and the Defendant is not entitled to relief. State v.
    Johnson, 
    970 S.W.2d 500
    , 508 (Tenn. Crim. App. 1996) (“Issues raised for the first time
    on appeal are considered waived.”).
    Here, the “John Doe” indictment, listing the Defendant’s genetic profile and
    naming the victim and date, was returned on February 12, 2015, within the fifteen-year
    statutory limitations period. A superseding indictment was returned in 2016, after the
    Defendant was identified by name. The trial court found on remand that the “John Doe”
    indictment had been continuously in the possession of the trial court clerk after it was
    issued. The court further found, consistent with the testimony of the ADA, that after the
    Defendant was identified as the perpetrator through his DNA, the indictment was
    - 15 -
    superseded by the 2016 indictment which named the Defendant. The Defendant was
    timely indicted and is not entitled to relief.
    II. Authentication and Chain of Custody
    The Defendant next asserts that the sexual assault kit should not have been
    admitted because it could not be properly authenticated due to a break in the chain of
    custody. He asserts that the authenticity of the sexual assault kit is “highly suspect
    because of inaccuracies and inconsistencies glaring enough to require the creation of an
    ‘amended’ chain of custody.” He contends that Special Agent James “was able to receive
    the kit on July 12, four days before it was received by the TBI” and that the kit had been
    “misidentified” when a report showed it as “purportedly submitted to the TBI on
    December 13, 2013 despite having already been in the possession of the TBI since July.”
    We conclude that the evidence presented to the trial court was adequate to establish the
    identity and integrity of the evidence.
    Tennessee Rule of Evidence 901 requires that physical evidence be authenticated
    prior to its admission, and authentication requires evidence sufficient “to support a
    finding by the trier of fact that the matter in question is what its proponent claims.”
    Tenn. R. Evid. 901(a). “[I]t is ‘well-established that as a condition precedent to the
    introduction of tangible evidence, a witness must be able to identify the evidence or
    establish an unbroken chain of custody.’” State v. Cannon, 
    254 S.W.3d 287
    , 296 (Tenn.
    2008) (quoting State v. Scott, 
    33 S.W.3d 746
    , 760 (Tenn. 2000)). Evidence should not be
    admitted if its identity and integrity cannot be demonstrated by chain of custody or other
    appropriate means. Scott, 
    33 S.W.3d at 760
    . This requirement is meant to preclude the
    possibility that the evidence has been subject to tampering, substitution, or mistake.
    Cannon, 254 S.W.3d at 296. Authentication requires that each link in the chain be
    sufficiently established, but “[a]n item is not necessarily precluded from admission as
    evidence if the State fails to call all of the witnesses who handled the item.” Id. The
    State is not required to prove the identity of the evidence beyond all possible doubt or to
    exclude every possibility of tampering. Id. Instead, it must “reasonably establish the
    identity and integrity of the evidence.” Id. If the State does not offer sufficient proof of
    the chain of custody of the item, it is not admissible unless its identity and integrity are
    demonstrated by other appropriate means. Id. (citing Scott, 
    33 S.W.3d at 760
    ).
    “Reasonable assurance, rather than absolute assurance, is the prerequisite for admission.”
    State v. Terry Scott, No. E2003-00360-CCA-R3-CD, 
    2003 WL 22326980
    , at *2 (Tenn.
    Crim. App. Oct. 9, 2003).
    A trial court’s decision to admit evidence based on establishing a chain of custody
    is reviewed for abuse of discretion. Scott, 
    33 S.W.3d at 752
    . This court will not reverse
    the trial court’s decision to admit evidence unless the court applied an incorrect legal
    - 16 -
    standard or reached a decision which was against logic or reasoning and which caused an
    injustice to the complaining party. Cannon, 254 S.W.3d at 295.
    At trial, the State presented testimony from Ms. DiScenza that she had collected
    DNA evidence by swabbing the victim and that she had placed the swabs into the sexual
    assault kit, sealed the kit, and placed the kit into a locked storage area. She was able to
    identify the sexual assault kit as the one she collected from the victim through her
    signature and markings. Mr. Smith then transported the evidence from the locked area of
    the Memphis Sexual Assault Resource Center to the north precinct on Old Allen Road,
    where it was placed in a locked, temperature-controlled room. He was likewise able to
    identify the evidence through his signature. The trial court was also presented with a
    supplement written by Ms. Garner which reflected that she recovered the kit from Old
    Allen Station on July 6, 2012, and that on July 16, 2012, she released it to the property
    and evidence room, immediately received it back, and delivered it to the TBI. She
    transported the kit from the TBI back to the property and evidence room of the Memphis
    Police Department on January 31, 2013; transported the kit from the property and
    evidence room back to the TBI on July 2, 2013; and returned it to the property and
    evidence room on February 10, 2014. A chain of custody report reflecting the transfers
    to and from the property room was also presented to the trial court.
    Special Agent James testified that he received the kit on July 16, 2012. He
    identified the kit through seals, markings, barcodes, his initials, and its unique lab
    number. The kit was sealed and showed no signs of tampering when he received it.
    After isolating sperm cells, he resealed the kit. He received the kit again for further
    testing on July 2, 2013, at which time the kit remained sealed and intact. Accordingly,
    the State presented witnesses establishing that the evidence was collected by Ms.
    DiScenza and that it was sealed by her and remained sealed until Special Agent James
    conducted testing on it. The evidence had spent a number of years at a locked and
    temperature-regulated storage facility, from which Ms. Garner retrieved it in 2012, prior
    to transferring it to the property and evidence room and subsequently to the TBI. The
    evidence was returned to the Memphis Police Department’s property and evidence room
    and then again transferred by Ms. Garner for further testing to the TBI, where Special
    Agent James again received it in a sealed condition. We conclude that the trial court did
    not abuse its discretion in finding that the chain of custody was properly established. See,
    e.g., State v. Tony Gibson, No. W2017-01235-CCA-R3-CD, 
    2018 WL 4677521
    , at *7
    (Tenn. Crim. App. Sept. 28, 2018) (the identity and integrity of the evidence was
    reasonably established when the officer who retrieved and transported the evidence did
    not testify, but other witnesses testified regarding the collection of the evidence and there
    was a lack of evidence suggesting tampering); State v. Kevin Allen Fleming, No. E2016-
    01746-CCA-R3-CD, 
    2018 WL 1433503
    , at *15-17 (Tenn. Crim. App. Mar. 22, 2018)
    (the chain of custody was adequately established when the trooper observed the
    - 17 -
    collection of the blood, sealed the kit, and took it to a secure evidence locker, and when
    the TBI agent testified regarding the integrity of the evidence once it was placed into the
    TBI drop box); State v. Randy Timothy Jones, No. M2017-00769-CCA-R3-CD, 
    2018 WL 1182573
    , at *5-6 (Tenn. Crim. App. Mar. 7, 2018) (the chain of custody was sufficiently
    established by the trooper’s testimony that he witnessed the collection of the blood,
    labeled and sealed it, and put it into a locked evidence drop box, and by testimony that
    the forensic technician received the box and that it was sealed and gave no indication of
    tampering); State v. Charles Drake, No. E2004-00247-CCA-R3-CD, 
    2005 WL 1330844
    ,
    at *14 (Tenn. Crim. App. June 6, 2005) (the chain of custody was adequately established
    when the officer who witnessed the collection of DNA evidence testified and the TBI
    technician testified regarding the circumstances around her receipt of the evidence and
    regarding its sealed condition, even though the transporting officer did not testify);
    compare Cannon, 254 S.W.3d at 298 (the chain of custody was not established when
    there was contradictory proof regarding whether or in what manner the evidence was
    recovered from the victim); Scott, 
    33 S.W.3d at 760-61
     (the evidence was not properly
    authenticated when it had been mounted on slides and there was no testimony explaining
    this alteration in the condition of the evidence); State v. Michael R. Anderson, No.
    M2008-01230-CCA-R3-CD, 
    2009 WL 856903
    , at *3-4 (Tenn. Crim. App. Mar. 31,
    2009) (the chain of custody was not established when the State did not present evidence
    regarding the sealing of the kit or what steps were taken to identify it to reduce the
    possibility of mistake).
    The Defendant contends that, despite this evidence, the chain of custody contains
    irregularities which require a finding that the identity of the kit was not reasonably
    established. Initially, the Defendant’s claim that the evidence was received by Special
    Agent James on July 12, 2012, has no support in the record. The Defendant cites to the
    January 8, 2013, report, but this report indicates, consistently with the other evidence,
    that the kit was received by the TBI on July 16, 2012.
    The Defendant also attacks the chain of custody based on an addendum to the TBI
    lab report. The unsigned addendum, which begins on “Page 2” and appears to have
    initials consistent with Special Agent James’s, states that the author became aware that
    evidence in an unrelated case was missing a submittal form, although TBI records
    reflected the evidence had been submitted on December 13, 2012. In investigating, the
    author discovered that the evidence in this unrelated case had not in fact been submitted
    on that date but had been in the continuous possession of the TBI since 2010. Out of
    caution, he investigated two other cases which were purportedly submitted by the same
    investigator from the Shelby County District Attorney’s office on the same date. In one
    of the cases, evidence was actually submitted on that date. The report reflects that, in the
    Defendant’s case, the evidence was not submitted on December 13, 2012, but was in the
    TBI’s possession and “being worked” on that date. The report concluded that the
    - 18 -
    evidence transfer noted in the system for that date was erroneous. Two reports related to
    the Defendant’s case were amended to reflect the correct chain of custody.
    The Defendant asserts that this report raises questions regarding the authenticity of
    the evidence. However, this particular contention has been waived. The partial TBI
    report was introduced for the first time into the record by the Defendant at the hearing on
    the motion for a new trial as “the analysis that was provided to us in discovery by the
    State.” At trial, the Defendant never argued that there was an error discovered by the TBI
    with respect to the chain of custody; instead, he merely asserted that the State had not
    established the chain of custody. Because the partial report was not raised at trial and
    was not before the trial court, the trial court did not have the opportunity to consider this
    evidence when it made its determination regarding the chain of custody at trial, and the
    State did not have any reason to elicit any testimony from Special Agent James regarding
    the partial report. The trial court, based on the evidence before it, ruled that the chain of
    custody had been adequately established. Furthermore, this particular issue was not
    raised in the motion for a new trial. At the motion hearing, the Defendant presented a
    cursory argument that the trial court had erred in its chain of custody determination. He
    also argued that an affidavit from his own expert demonstrated that the State’s expert had
    miscalculated the probability that the Defendant’s DNA was the DNA recovered from the
    swabs. The Defendant introduced the discovery related to DNA analysis only to be
    considered as the data that the Defendant’s own expert had relied on in forming her
    opinion, and the partial report at issue was page fifty-one of the 105 pages of discovery
    introduced as an exhibit. The trial court made no ruling regarding the effect of the partial
    report on the authentication of the evidence because the issue was not raised.
    Accordingly, this particular objection is waived. See State v. Howard, 
    504 S.W.3d 260
    ,
    277 (Tenn. 2016) (“It is well-settled that a defendant may not advocate a different or
    novel position on appeal.”); Johnson, 
    970 S.W.2d at 508
    . Because the trial court did not
    abuse its discretion in determining that the identity and integrity of the evidence was
    adequately established by testimony that it was collected from the victim, sealed, stored
    in a locked facility, and remained sealed at the time the TBI received it for analysis, the
    Defendant is not entitled to relief.
    CONCLUSION
    Based on the foregoing analysis, we affirm the judgment of the trial court.
    ___________________________________________
    JOHN EVERETT WILLIAMS, PRESIDING JUDGE
    - 19 -